RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CEACAM19Q7Z692 300 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 ZNF573Q86YE8 665 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 YIPF5Q969M3 257 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 PKIBQ9C010 78 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 NOX4Q9NPH5 578 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 TMEM138Q9NPI0 162 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 GPR173Q9NS66 373 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 SLC7A11Q9UPY5 501 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 PPP1R3CQ9UQK1 317 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 AKAP9Q99996 3911 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 ABCA1O95477 2261 aa12.04□□□□□ -0.48
SSBP1-201ENST00000265304 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 ARL6IP5O75915 188 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 SRMP19623 302 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 RAB3AP20336 220 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 AZGP1P25311 298 aaKnown RBP12.03□□□□□ -0.48
SSBP1-201ENST00000265304 RBP2P50120 134 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 GPM6AP51674 278 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 CEP78Q5JTW2 689 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 WDR82Q6UXN9 313 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 LHFPL2Q6ZUX7 228 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 LRRTM1Q86UE6 522 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 SCCPDHQ8NBX0 429 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 Q8NFD4 153 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 OR51A2Q8NGJ7 313 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 OR13C9Q8NGT0 318 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 AQP3Q92482 292 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 TMEM203Q969S6 136 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 CHODLQ9H9P2 273 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 FN3KRPQ9HA64 309 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 NEK6Q9HC98 313 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 STUB1Q9UNE7 303 aa12.03□□□□□ -0.48
SSBP1-201ENST00000265304 SRRM5B3KS81 715 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 TMEM178BH3BS89 294 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 CD36P16671 472 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 CFPP27918 469 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 RPL5P46777 297 aaKnown RBP12.02□□□□□ -0.49
SSBP1-201ENST00000265304 ATP1B3P54709 279 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 ERVK11-1P61568 191 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 IL24Q13007 206 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 FAM27D1Q5T7N8 215 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 ZSCAN4Q8NAM6 433 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-201ENST00000265304 C10orf105Q8TEF2 133 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 HPS1Q92902 700 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 DVL3Q92997 716 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-201ENST00000265304 SEBOXQ9HB31 216 aaPredicted RBP12.02□□□□□ -0.49
SSBP1-201ENST00000265304 RHOFQ9HBH0 211 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 SNTG1Q9NSN8 517 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 TMEM106BQ9NUM4 274 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 TAS2R4Q9NYW5 299 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 CKLFQ9UBR5 152 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
SSBP1-201ENST00000265304 CR1P17927 2039 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 J3QT63 122 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 TNFRSF13BO14836 293 aaPredicted RBP12.01□□□□□ -0.49
SSBP1-201ENST00000265304 LY6HO94772 140 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 ADRA2CP18825 462 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 BDKRB2P30411 391 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 PDLIM4P50479 330 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 ZP1P60852 638 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 KISS1Q15726 138 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 HFEQ30201 348 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 HSD17B12Q53GQ0 312 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 C1orf100Q5SVJ3 147 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 PRAMEF6Q5VXH4 476 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 CALHM1Q8IU99 346 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 GCSAMQ8N6F7 178 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 NKAIN3Q8N8D7 197 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 PXT1Q8NFP0 134 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 TMIGD2Q96BF3 282 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 ORAI1Q96D31 301 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 BORCS8Q96FH0 119 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 PERPQ96FX8 193 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 TXNL4BQ9NX01 149 aaKnown RBP12.01□□□□□ -0.49
SSBP1-201ENST00000265304 RNF7Q9UBF6 113 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 CACNG2Q9Y698 323 aa12.01□□□□□ -0.49
SSBP1-201ENST00000265304 DSCAML1Q8TD84 2053 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 A0A096LNT2 108 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 A0A1W2PPK0 400 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 LRRC30A6NM36 301 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12□□□□□ -0.49
SSBP1-201ENST00000265304 CDIPTO14735 213 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 SSX4O60224 188 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 PGA5P0DJD9 388 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 CPT2P23786 658 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 GADD45AP24522 165 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 MTCP1P56278 107 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 PPP3R1P63098 170 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 PDZK1IP1Q13113 114 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 DMRTC1Q5HYR2 192 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 FAM166AQ6J272 317 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 RNF144BQ7Z419 303 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 FAM90A1Q86YD7 464 aa12□□□□□ -0.49
SSBP1-201ENST00000265304 ANKRD13BQ86YJ7 626 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms