RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 A0A1W2PQF6 199 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 SHISA7A6NL88 538 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 SLC31A1O15431 190 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 DFFBO76075 338 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 HLA-DQA2P01906 255 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 AMBPP02760 352 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 NPSP0C0P6 89 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 FOSL2P15408 326 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 GLRA1P23415 457 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 P2RY1P47900 373 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 SMAD4Q13485 552 aaKnown RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 HAGHQ16775 308 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 DEFB123Q8N688 67 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 APCDD1LQ8NCL9 501 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 CNTD2Q9H8S5 307 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 B9D1Q9UPM9 204 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 SCN2AQ99250 2005 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 FIGNL2A6NMB9 653 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 GEMIN2O14893 280 aaKnown RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 GCGP01275 180 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 LINC00614P0C842 121 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 APOBEC1P41238 236 aaKnown RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 GAGE1Q13065 139 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 DCAF10Q5QP82 559 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 LCN10Q6JVE6 187 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 TMEM182Q6ZP80 229 aaPredicted RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 C16orf52Q8NHV5 167 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 ADGRG7Q96K78 797 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 NUDT16L1Q9BRJ7 211 aaKnown RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 WNT5BQ9H1J7 359 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 PRTFDC1Q9NRG1 225 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 FOXD3Q9UJU5 478 aaPredicted RBP11.59□□□□□ -0.55
NUP54-201ENST00000264883 RHBDD3Q9Y3P4 386 aa11.59□□□□□ -0.55
NUP54-201ENST00000264883 CDRT15L2A8MXV6 281 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 SCDO00767 359 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 SCGB1D2O95969 90 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 SRP19P09132 144 aaKnown RBP11.58□□□□□ -0.56
NUP54-201ENST00000264883 METTL15P1P0C7V9 234 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 RPS2P15880 293 aaKnown RBP11.58□□□□□ -0.56
NUP54-201ENST00000264883 AKT2P31751 481 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 GNG10P50151 68 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 EGR4Q05215 589 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 SQSTM1Q13501 440 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 PCK2Q16822 640 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
NUP54-201ENST00000264883 CATSPERDQ86XM0 798 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 FNDC9Q8TBE3 224 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 C5orf34Q96MH7 638 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
NUP54-201ENST00000264883 C1orf123Q9NWV4 160 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 IL17BQ9UHF5 180 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 HHLA2Q9UM44 414 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 CACNA1CQ13936 2221 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 FANCMQ8IYD8 2048 aa11.58□□□□□ -0.56
NUP54-201ENST00000264883 TRBV23OR9-2A0A075B6M9 112 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 FTCDNL1E5RQL4 147 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 MT-ATP6P00846 226 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 PVRP15151 417 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 DRD1P21728 446 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 GABRR1P24046 479 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 CCL20P78556 96 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 RD3Q7Z3Z2 195 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 LYPD6Q86Y78 171 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 ARHGEF39Q8N4T4 335 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 OR5H2Q8NGV7 314 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 FOXN4Q96NZ1 517 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 NIPSNAP3BQ9BS92 247 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 CBLN4Q9NTU7 201 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 HRASLS2Q9NWW9 162 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 SUSD2Q9UGT4 822 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 TUBD1Q9UJT1 453 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 DOCK9Q9BZ29 2069 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
NUP54-201ENST00000264883 OR6A2O95222 327 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 IL33O95760 270 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 ISG15P05161 165 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 COL9A1P20849 921 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 RBMXP38159 391 aaKnown RBP11.57□□□□□ -0.56
NUP54-201ENST00000264883 RND3P61587 244 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 THEM4Q5T1C6 240 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 OR13G1Q8NGZ3 307 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 CCL4L1Q8NHW4 92 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 NPRL2Q8WTW4 380 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 THOC3Q96J01 351 aaKnown RBP11.57□□□□□ -0.56
NUP54-201ENST00000264883 CYP8B1Q9UNU6 501 aa11.57□□□□□ -0.56
NUP54-201ENST00000264883 TRAV36DV7A0A075B6V5 113 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KIR2DS5A0A0G2JLQ3 304 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 A0A0G2JNG1 304 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 K7N7A8 449 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KIR2DS3K7RE56 304 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 LMX1BO60663 402 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 KLF8O95600 359 aaPredicted RBP11.56□□□□□ -0.56
NUP54-201ENST00000264883 CHRM2P08172 466 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 THEGLP0DJG4 465 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 VSIG8P0DPA2 414 aa11.56□□□□□ -0.56
NUP54-201ENST00000264883 HOXB2P14652 356 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms