RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 FBXL17Q9UF56 701 aa8□□□□□ -1.13
MSH4-201ENST00000263187 KNTC1P50748 2209 aa8□□□□□ -1.13
MSH4-201ENST00000263187 RNASEK-C17orf49H0YIS7 233 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 K7EPK0 472 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 FGF16O43320 207 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 ZFAND5O76080 213 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 CSTBP04080 98 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 SNRNP70P08621 437 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 GSTP1P09211 210 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 CD79AP11912 226 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 CSNK1A1P48729 337 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 DCDP81605 110 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 PIGYQ3MUY2 71 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 FAM76BQ5HYJ3 339 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 C9orf135Q5VTT2 229 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 RHBDD2Q6NTF9 364 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 SLC25A47Q6Q0C1 308 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 MISPQ8IVT2 679 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 FAM71E2Q8N5Q1 922 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 OR11L1Q8NGX0 322 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 ASB13Q8WXK3 278 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 C2orf50Q96LR7 162 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 SULT4A1Q9BR01 284 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 SLC5A7Q9GZV3 580 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.13
MSH4-201ENST00000263187 PCDHGA1Q9Y5H4 931 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 MAP1BP46821 2468 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 A0A1W2PQM1 296 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 RAB19A4D1S5 217 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 F8VVB4 439 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 F8VWA3 439 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 HSPB6O14558 160 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 TNFSF11O14788 317 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 ZNF708P17019 499 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 FPR2P25090 351 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 ACKR3P25106 362 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 ADH6P28332 368 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 F2RL1P55085 397 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 TMEM33P57088 247 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 CYCSP99999 105 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 FLI1Q01543 452 aaPredicted RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 PJVKQ0ZLH3 352 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 MEX3BQ6ZN04 569 aaKnown RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 DOK3Q7L591 496 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 HSD17B11Q8NBQ5 300 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 OR2M3Q8NG83 312 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 AKR7LQ8NHP1 331 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 C14orf79Q96F83 325 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 MRGPRX4Q96LA9 322 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 NRIP2Q9BQI9 281 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 PIGQQ9BRB3 760 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 RPS10P5Q9NQ39 176 aa7.99□□□□□ -1.13
MSH4-201ENST00000263187 FBXO9Q9UK97 447 aaPredicted RBP7.99□□□□□ -1.13
MSH4-201ENST00000263187 ZNF98A6NK75 572 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 NPIPA2E9PIF3 369 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 NPIPA3F8WFD2 350 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 IFNA2P01563 188 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 HKR1P10072 659 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OMGP23515 440 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 GPR85P60893 370 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 GGNBP1Q5YKI7 109 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ZNF529Q6P280 563 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 FAHD2BQ6P2I3 314 aaPredicted RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 CRIP3Q6Q6R5 217 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 C5orf46Q6UWT4 87 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 LYZL2Q7Z4W2 148 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ARRDC1Q8N5I2 433 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 POC1AQ8NBT0 407 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 FNDC9Q8TBE3 224 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 FAHD2AQ96GK7 314 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OXGR1Q96P68 337 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ALKBH3Q96Q83 286 aaPredicted RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 SH3BGRL3Q9H299 93 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RAB18Q9NP72 206 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 MMP26Q9NRE1 261 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ZNF107Q9UII5 783 aaPredicted RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 OSGIN2Q9Y236 505 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ZNF175Q9Y473 711 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 M0R036 132 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 MSTNO14793 375 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 TNFSF12O43508 249 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 CCL3P10147 92 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RPS2P15880 293 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 CCNOP22674 350 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RAB13P51153 203 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 AFF3P51826 1226 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 PIGPP57054 158 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RSPO1Q2MKA7 263 aaPredicted RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 KRBOX4Q5JUW0 171 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 VAX1Q5SQQ9 334 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 ZNF774Q6NX45 483 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 DHRS11Q6UWP2 260 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 OR5T2Q8NGG2 359 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 RSRP1Q9BUV0 290 aa7.98□□□□□ -1.13
MSH4-201ENST00000263187 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
MSH4-201ENST00000263187 RARRES3Q9UL19 164 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms