RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
SMG6-201ENST00000263073 ASCC3Q8N3C0 2202 aaKnown RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 C4orf47A7E2U8 309 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 GEMIN2O14893 280 aaKnown RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 FZD6O60353 706 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 SFT2D2O95562 160 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 MDKP21741 143 aaPredicted RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 C10orf111Q8N326 155 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 CISD2Q8N5K1 135 aaKnown RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 RFESDQ8TAC1 157 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 SLC25A43Q8WUT9 341 aaPredicted RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 SNX22Q96L94 193 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 NOL4LQ96MY1 436 aaPredicted RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 COMMD5Q9GZQ3 224 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 PRSS23O95084 383 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 IL3RAP26951 378 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 FAM3AP98173 230 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 RTL8BQ17RB0 113 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 ZNF573Q86YE8 665 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 HLA-CQ95604 372 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 CLDN23Q96B33 292 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 ZMIZ1Q9ULJ6 1067 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 TIMM9Q9Y5J7 89 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 A0A087X0M5 115 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 A0A1B0GX30 115 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 CDC14BO60729 498 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 RNF224P0DH78 156 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 CEACAM6P40199 344 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 TCL1AP56279 114 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 C1QTNF12Q5T7M4 302 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 OR4C3Q8NH37 302 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 GPR137Q96N19 417 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 WDFY2Q96P53 400 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 RAB18Q9NP72 206 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 AURKAIP1Q9NWT8 199 aaPredicted RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 MTFP1Q9UDX5 166 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 FCN1O00602 326 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 PPIAP62937 165 aaKnown RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 LSM11P83369 360 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMG6-201ENST00000263073 ZNF880Q6PDB4 577 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 FBXO46Q6PJ61 603 aaPredicted RBP10.79□□□□□ -0.68
SMG6-201ENST00000263073 BTNL3Q6UXE8 466 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 SLC35B3Q9H1N7 401 aa10.79□□□□□ -0.68
SMG6-201ENST00000263073 ZNF117Q03924 483 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 KISS1Q15726 138 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 EXT1Q16394 746 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 BVESQ8NE79 360 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 WNT2BQ93097 391 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 ERRFI1Q9UJM3 462 aaPredicted RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 ATP23Q9Y6H3 246 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 A0A0B4J2E0 115 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 A0A1B0GX12 115 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 A0A1W2PPE2 198 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 SCGB1C2P0DMR2 95 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 CEACAM16Q2WEN9 425 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 OR10AD1Q8NGE0 317 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 OR4D11Q8NGI4 311 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 EDAQ92838 391 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 CLEC5AQ9NY25 188 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 HS3ST3A1Q9Y663 406 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 ZGLP1P0C6A0 271 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 FGF9P31371 208 aaPredicted RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 KCNJ3P48549 501 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 CDC34P49427 236 aaPredicted RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 CAMPP49913 170 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 DGAT2L6Q6ZPD8 337 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 CMTM3Q96MX0 182 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 POLDIP2Q9Y2S7 368 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 CNTRLQ7Z7A1 2325 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 ANKRD36CQ5JPF3 1778 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 HIST1H1DP16402 221 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 TMEM33P57088 247 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 ERHP84090 104 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 KLHDC1Q8N7A1 406 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 PRDM7Q9NQW5 492 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 UQCC1Q9NVA1 299 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 EXOGQ9Y2C4 368 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 SPP1P10451 314 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 DYNLT3P51808 116 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 IFITM3Q01628 133 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 GALMQ96C23 342 aa10.78□□□□□ -0.68
SMG6-201ENST00000263073 MRPS2Q9Y399 296 aaKnown RBP10.78□□□□□ -0.68
SMG6-201ENST00000263073 KCNE1BA0A087WTH5 132 aa10.77□□□□□ -0.68
SMG6-201ENST00000263073 ANKRD20A5PA0PJZ0 165 aa10.77□□□□□ -0.68
SMG6-201ENST00000263073 POLR2GP62487 172 aaKnown RBP eCLIP10.77□□□□□ -0.68
SMG6-201ENST00000263073 TMEM241Q24JQ0 296 aa10.77□□□□□ -0.68
SMG6-201ENST00000263073 COL13A1Q5TAT6 717 aaPredicted RBP10.77□□□□□ -0.68
SMG6-201ENST00000263073 MIOXQ9UGB7 285 aa10.77□□□□□ -0.68
SMG6-201ENST00000263073 C3orf85A0A1B0GTC6 90 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 FRG2CA6NGY1 282 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 CSN3P07498 182 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 B2MP61769 119 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 CLN3Q13286 438 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 ADAD2Q8NCV1 583 aaKnown RBP10.77□□□□□ -0.69
SMG6-201ENST00000263073 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
SMG6-201ENST00000263073 CA10Q9NS85 328 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms