RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IL12BP29460 328 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 P2RY1P47900 373 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 OR8G1Q15617 311 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 ARMC6Q6NXE6 501 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 OR51E1Q8TCB6 317 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 SLAMF6Q96DU3 332 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 ZDHHC8Q9ULC8 765 aa13.21□□□□□ -0.29
XRCC1-201ENST00000262887 IGKV1D-43A0A0B4J1Z2 117 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BKO60814 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 AHSA1O95433 338 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BJP06899 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BOP23527 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BBP33778 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 PPP1CCP36873 323 aaKnown RBP13.21□□□□□ -0.3
XRCC1-201ENST00000262887 CEACAM6P40199 344 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 POLR2HP52434 150 aaKnown RBP13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BDP58876 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BCP62807 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 PPA1Q15181 289 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 PRTGQ2VWP7 1150 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.3
XRCC1-201ENST00000262887 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 LRRC18Q8N456 261 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 TMEM156Q8N614 296 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 ADAMTS18Q8TE60 1221 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 Q8WTZ3 238 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 C1orf147Q96MC9 270 aaPredicted RBP13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 RARRES2Q99969 163 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 GPR61Q9BZJ8 451 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 SH3BGRL3Q9H299 93 aa13.21□□□□□ -0.3
XRCC1-201ENST00000262887 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 MARCH11A6NNE9 402 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 E5RGE8 158 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NPIPB7O75200 414 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 PAX1P15863 534 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SERPINA2P20848 420 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 PDZD11Q5EBL8 140 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SLC37A2Q8TED4 501 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 GPER1Q99527 375 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 URM1Q9BTM9 101 aaKnown RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NSG2Q9Y328 171 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 PTPRSQ13332 1948 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 ELOA3CA0A087WX78 387 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 LINC01553A4QN01 128 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 RPL36A-HNRNPH2H7BZ11 118 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SOD3P08294 240 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 CXCL1P09341 107 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 IL11P20809 199 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 TAGLN2P37802 199 aaKnown RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 GABRA4P48169 554 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NHLH2Q02577 135 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 ELOBQ15370 118 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 GFI1BQ5VTD9 330 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF343Q6P1L6 599 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SGPP2Q8IWX5 399 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 JSRP1Q96MG2 331 aaPredicted RBP13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NELFAQ9H3P2 528 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 SMDT1Q9H4I9 107 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 FAM86C1Q9NVL1 165 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 NPIPA1Q9UND3 350 aa13.2□□□□□ -0.3
XRCC1-201ENST00000262887 FRG2CA6NGY1 282 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 A6NIZ1 184 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 ZNF726A6NNF4 738 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 H3BQ15 152 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 NSA2O95478 260 aaKnown RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 G0S2P27469 103 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 RAP1BP61224 184 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 NKX6-1P78426 367 aaPredicted RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 CHRFAM7AQ494W8 412 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 KHDC3LQ587J8 217 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 SNIP1Q8TAD8 396 aaKnown RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 PTPMT1Q8WUK0 201 aaPredicted RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 RAB39BQ96DA2 213 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 KCNIP3Q9Y2W7 256 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 AFF3P51826 1226 aaKnown RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 HIKESHIQ53FT3 197 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 CARFQ8N187 725 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 HSD17B11Q8NBQ5 300 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
XRCC1-201ENST00000262887 UNKLQ9H9P5 680 aaKnown RBP13.19□□□□□ -0.3
XRCC1-201ENST00000262887 TMEM131Q92545 1883 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 GPR137BO60478 399 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 PLXDC2Q6UX71 529 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 ABHD12BQ7Z5M8 362 aaPredicted RBP13.18□□□□□ -0.3
XRCC1-201ENST00000262887 OR5AS1Q8N127 324 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 ASB10Q8WXI3 467 aa13.18□□□□□ -0.3
XRCC1-201ENST00000262887 WNT5BQ9H1J7 359 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms