RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 ZNF250P15622 560 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 PTGFRP43088 359 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 MMP16P51512 607 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ATP1B3P54709 279 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 IKZF1Q13422 519 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF766Q5HY98 468 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 TEX30Q5JUR7 227 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 SLC25A47Q6Q0C1 308 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 C12orf45Q8N5I9 185 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 PPP1R14BQ96C90 147 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 STARD10Q9Y365 291 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 F5H5P2 479 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 CDC14BO60729 498 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ECDO95905 644 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 LPLP06858 475 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ICAM2P13598 275 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF17P17021 662 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ROM1Q03395 351 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ATPAF1Q5TC12 328 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 METTL11BQ5VVY1 283 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 FAM53AQ6NSI3 398 aaPredicted RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF826PQ6ZT77 177 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 OR10R2Q8NGX6 335 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 OR1F12Q8NHA8 337 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 RNASE11Q8TAA1 199 aaKnown RBP7.93□□□□□ -1.14
CKAP2-201ENST00000258607 PNPLA2Q96AD5 504 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 SYT3Q9BQG1 590 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 TMEM231Q9H6L2 316 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 MSL2Q9HCI7 577 aa7.93□□□□□ -1.14
CKAP2-201ENST00000258607 CPAMD8Q8IZJ3 1885 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ANKRD34BA5PLL1 514 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 F5H0A9 414 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ICMTO60725 284 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 C1QBP02746 253 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 RAF1P04049 648 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 CSF1P09603 554 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 SRD5A2P31213 254 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 TMEM50BP56557 158 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 TAS2R19P59542 299 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ACTBP60709 375 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ACTG1P63261 375 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF546Q86UE3 836 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 GGNQ86UU5 652 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 SPERTQ8NA61 448 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ZBTB44Q8NCP5 570 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 OR11L1Q8NGX0 322 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 LILRB4Q8NHJ6 448 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 SCMH1Q96GD3 660 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 CMSS1Q9BQ75 279 aaKnown RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF175Q9Y473 711 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 KIAA1549Q9HCM3 1950 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 PKD1L2Q7Z442 2459 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 TNCP24821 2201 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 K7EM74 188 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 HSPA12AO43301 675 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 MPC2O95563 127 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 CD63P08962 238 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 CD46P15529 392 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 NAGAP17050 411 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 LUMP51884 338 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF239Q16600 458 aaKnown RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 DEFB108BQ8NET1 73 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 OR2AK2Q8NG84 335 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 M1APQ8TC57 530 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF2Q9BSG1 426 aaPredicted RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 URM1Q9BTM9 101 aaKnown RBP7.92□□□□□ -1.14
CKAP2-201ENST00000258607 CHRNA10Q9GZZ6 450 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 LPAR5Q9H1C0 372 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 GPR35Q9HC97 309 aa7.92□□□□□ -1.14
CKAP2-201ENST00000258607 H3BP45 60 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SIRPB1O00241 398 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 PPP3CBP16298 524 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 EIF2S3P41091 472 aaKnown RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 PLP2Q04941 152 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 RSPO1Q2MKA7 263 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ZNF680Q8NEM1 530 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 RFESDQ8TAC1 157 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 MS4A7Q9GZW8 240 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 MAGT1Q9H0U3 335 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SLCO5A1Q9H2Y9 848 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SEMA5BQ9P283 1151 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 RNF150Q9ULK6 438 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 DHRS7CA6NNS2 312 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 DISC1C4P0D8 188 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 NDUFB6O95139 128 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 CXCL2P19875 107 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ACP1P24666 158 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SERPINF1P36955 418 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SUMO3P55854 103 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 PRB3Q04118 309 aaPredicted RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 OPCMLQ14982 345 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 SLC22A25Q6T423 547 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 CARFQ8N187 725 aa7.91□□□□□ -1.14
CKAP2-201ENST00000258607 ZCCHC24Q8N2G6 241 aaKnown RBP7.91□□□□□ -1.14
CKAP2-201ENST00000258607 FADS6Q8N9I5 356 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms