RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 DND1Q8IYX4 353 aaKnown RBP10.5□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM99Q8N816 258 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 OR2T33Q8NG76 320 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 OR4D6Q8NGJ1 314 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 OR52E1Q8NGJ3 308 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 RPS4Y2Q8TD47 263 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 SCARF2Q96GP6 870 aaPredicted RBP10.5□□□□□ -0.73
CCNA1-201ENST00000255465 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 CST9LQ9H4G1 147 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 EGLN3Q9H6Z9 239 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF552Q9H707 407 aaPredicted RBP10.5□□□□□ -0.73
CCNA1-201ENST00000255465 ELL3Q9HB65 397 aaPredicted RBP10.5□□□□□ -0.73
CCNA1-201ENST00000255465 PLSCR4Q9NRQ2 329 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 PSG11Q9UQ72 335 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 BPTFQ12830 3046 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 LMO7DNF2Z398 122 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 J3KRW8 73 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 J3QW42 95 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 XKRYO14609 159 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 NDUFB8O95169 186 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 WNT11O96014 354 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 CELA2BP08218 269 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 SELENOVP59797 346 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ELOCQ15369 112 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 TRIP6Q15654 476 aaKnown RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ZXDCQ2QGD7 858 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 RNF175Q8N4F7 328 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 OR4D5Q8NGN0 318 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 C4orf36Q96KX1 117 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 CMKLR1Q99788 373 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 NKX3-1Q99801 234 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 HINT3Q9NQE9 182 aaKnown RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF701Q9NV72 531 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ANKRD10Q9NXR5 420 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 MRPL27Q9P0M9 148 aaKnown RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 KCNK6Q9Y257 313 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PTPRBP23467 1997 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 SPTBN2O15020 2390 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 IGHV2OR16-5A0A0B4J2B6 119 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 SPAARA0A1B0GVQ0 90 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PRAMEF27A3QJZ7 478 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 C5orf51A6NDU8 294 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ETV2O00321 342 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PEX12O00623 359 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 HSD17B6O14756 317 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PRAMEF4O60810 478 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 CD3DP04234 171 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 OR5G3P0C626 314 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 EPORP19235 508 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 RAB11AP62491 216 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PDE7AQ13946 482 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ARL6IP1Q15041 203 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 NSDHLQ15738 373 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 DEFB133Q30KQ1 61 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 PRAMEF9Q5VWM5 478 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 LEG1Q6P5S2 330 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 EXD3Q8N9H8 876 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 OR51A2Q8NGJ7 313 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 CCL4L1Q8NHW4 92 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 ABHD3Q8WU67 409 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM170AQ8WVE7 144 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 JSRP1Q96MG2 331 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-201ENST00000255465 G6PC3Q9BUM1 346 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 DUSP23Q9BVJ7 150 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
CCNA1-201ENST00000255465 NINQ8N4C6 2090 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 J3QLW9 94 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 GEMIN2O14893 280 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 TNFSF14O43557 240 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 RAMP1O60894 148 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 MTX2O75431 263 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 CTAG2O75638 210 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 TBX6O95947 436 aaPredicted RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ONECUT2O95948 504 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 HSPB1P04792 205 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF735P0CB33 412 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF19P17023 458 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 RPS4Y1P22090 263 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ACVR1BP36896 505 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ALDH3B1P43353 468 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 PNLIPRP1P54315 467 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 RPS11P62280 158 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 IL13RA1P78552 427 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 LTBQ06643 244 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 GPR18Q14330 331 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 RPL7L1Q6DKI1 246 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 CATSPERDQ86XM0 798 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 CPOQ8IVL8 374 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 FAM89BQ8N5H3 189 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 OR10H4Q8NGA5 316 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 OR5L1Q8NGL2 311 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 OR4S2Q8NH73 311 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 ZCCHC14Q8WYQ9 949 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 FAM46AQ96IP4 442 aaKnown RBP10.48□□□□□ -0.73
CCNA1-201ENST00000255465 IL17FQ96PD4 163 aa10.48□□□□□ -0.73
CCNA1-201ENST00000255465 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms