RNA–Protein interactions for RNA: ENST00000254351.8

SDC1-201, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC1, Length 3,147 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-201ENST00000254351 HSD11B1P28845 292 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 IL12BP29460 328 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 RBP2P50120 134 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 ROM1Q03395 351 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 PEG10Q86TG7 708 aaKnown RBP12.68□□□□□ -0.38
SDC1-201ENST00000254351 NKAIN3Q8N8D7 197 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 OR5L1Q8NGL2 311 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.68□□□□□ -0.38
SDC1-201ENST00000254351 SLAMF6Q96DU3 332 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 LURAP1Q96LR2 239 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 LANCL2Q9NS86 450 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 B3GALT5Q9Y2C3 310 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 HDGFL3Q9Y3E1 203 aa12.68□□□□□ -0.38
SDC1-201ENST00000254351 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
SDC1-201ENST00000254351 AHSA1O95433 338 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 IFNA21P01568 189 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 MBPP02686 304 aaPredicted RBP12.67□□□□□ -0.38
SDC1-201ENST00000254351 CRABP1P29762 137 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 THBS4P35443 961 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 SSTP61278 116 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 TOMM20Q15388 145 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 NKAIN1Q4KMZ8 207 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 OGFOD3Q6PK18 319 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 DTWD2Q8NBA8 298 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 MAGT1Q9H0U3 335 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 HSF4Q9ULV5 492 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 FREM2Q5SZK8 3169 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 TRAV36DV7A0A075B6V5 113 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 NPIPA5E9PKD4 350 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 ONECUT2O95948 504 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 FSTP19883 344 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 C5AR1P21730 350 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 FPR2P25090 351 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 DLK1P80370 383 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 QRFPP83859 136 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 ARMC6Q6NXE6 501 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 FDX2Q6P4F2 183 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 STX12Q86Y82 276 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 ZNF248Q8NDW4 579 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 OR52M1Q8NGK5 317 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 THRSPQ92748 146 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 VN1R1Q9GZP7 353 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 DUSP15Q9H1R2 295 aaPredicted RBP12.67□□□□□ -0.38
SDC1-201ENST00000254351 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 NPIPA1Q9UND3 350 aa12.67□□□□□ -0.38
SDC1-201ENST00000254351 B4DGG1 531 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 TAAR5O14804 337 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 CYTIPO60759 359 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 DEDDO75618 318 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 GP1BBP13224 206 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 AKR1C8PQ5T2L2 129 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 ZNF385CQ66K41 422 aaPredicted RBP12.66□□□□□ -0.38
SDC1-201ENST00000254351 SLC37A2Q8TED4 501 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 TUBA4BQ9H853 241 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 GPR84Q9NQS5 396 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 ZNF319Q9P2F9 582 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 PADI1Q9ULC6 663 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 URB1O60287 2271 aaKnown RBP12.66□□□□□ -0.38
SDC1-201ENST00000254351 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 A8MVM7 634 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 BPNT1O95861 308 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 NR2C1P13056 603 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 FBXW4P57775 412 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 HMGN3Q15651 99 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 TMEM123Q8N131 208 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 CYB561D1Q8N8Q1 229 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 PMM1Q92871 262 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 TCTN2Q96GX1 697 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 DNAJB11Q9UBS4 358 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 ASXL3Q9C0F0 2248 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 DANCRP0C864 163 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 RPS2P15880 293 aaKnown RBP12.66□□□□□ -0.38
SDC1-201ENST00000254351 Q7L0L9 218 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 SGPP2Q8IWX5 399 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 PIGTQ969N2 578 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 C1orf123Q9NWV4 160 aa12.66□□□□□ -0.38
SDC1-201ENST00000254351 A0A0J9YY10 115 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 TERTO14746 1132 aaKnown RBP12.65□□□□□ -0.38
SDC1-201ENST00000254351 TMEM225BP0DP42 221 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 TUBG1P23258 451 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 PIGPP57054 158 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 FOXK1P85037 733 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 FAM57BQ71RH2 274 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 C11orf40Q8WZ69 217 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 SCRT1Q9BWW7 348 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 OPA3Q9H6K4 179 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 SOHLH2Q9NX45 425 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 CEP290O15078 2479 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 A0A087WZY1 265 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 BORCS7-ASMTA0A0B4J1R7 106 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 ZNF850A8MQ14 1090 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 TSTD3H0UI37 97 aa12.65□□□□□ -0.38
SDC1-201ENST00000254351 STMND1H3BQB6 276 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms