RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 AGTR1P30556 359 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 C3AR1Q16581 482 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 C12orf45Q8N5I9 185 aaPredicted RBP19.84■□□□□ 0.77
HOXD9-201ENST00000249499 EIF3KQ9UBQ5 218 aaKnown RBP19.84■□□□□ 0.77
HOXD9-201ENST00000249499 OPN4Q9UHM6 478 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 CEACAM18A8MTB9 384 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 MPGP29372 298 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 CCL11P51671 97 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 LPCAT3Q6P1A2 487 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 TMPRSS7Q7RTY8 843 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 TMED4Q7Z7H5 227 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 FDCSPQ8NFU4 85 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 FBXW5Q969U6 566 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 APOBEC3DQ96AK3 386 aaPredicted RBP19.84■□□□□ 0.77
HOXD9-201ENST00000249499 CHIAQ9BZP6 476 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 ELL3Q9HB65 397 aaPredicted RBP19.84■□□□□ 0.77
HOXD9-201ENST00000249499 HSF4Q9ULV5 492 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 VSIG4Q9Y279 399 aa19.84■□□□□ 0.77
HOXD9-201ENST00000249499 LOC100509620A0A075B734 347 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 A0A096LPE4 126 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 A0A1W2PPZ6 126 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 F5H5P2 479 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 CSTBP04080 98 aaKnown RBP19.83■□□□□ 0.76
HOXD9-201ENST00000249499 CEACAM1P13688 526 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 TAS2R46P59540 309 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 PLP2Q04941 152 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 CAMK2BQ13554 666 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 RSU1Q15404 277 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 LGALSLQ3ZCW2 172 aaPredicted RBP19.83■□□□□ 0.76
HOXD9-201ENST00000249499 DMRTC1Q5HYR2 192 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 OR10K1Q8NGX5 313 aa19.83■□□□□ 0.76
HOXD9-201ENST00000249499 GMPPAQ96IJ6 420 aaPredicted RBP19.83■□□□□ 0.76
HOXD9-201ENST00000249499 REPIN1Q9BWE0 567 aaKnown RBP19.83■□□□□ 0.76
HOXD9-201ENST00000249499 TRAV17A0A0B4J275 112 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 FAM230AA0A1W2PPH8 454 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 IL2RAP01589 272 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 HLA-HP01893 362 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 CSN2P05814 226 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 UBE2MP61081 183 aaKnown RBP19.82■□□□□ 0.76
HOXD9-201ENST00000249499 MICBQ29980 383 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 FBXW9Q5XUX1 488 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 RTN4RL2Q86UN3 420 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 UXS1Q8NBZ7 420 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 NANOS1Q8WY41 292 aaKnown RBP19.82■□□□□ 0.76
HOXD9-201ENST00000249499 MRGPRFQ96AM1 343 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 SCGB3A2Q96PL1 93 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 IGKV1-27A0A075B6S5 117 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 SS18L1O75177 396 aaPredicted RBP19.82■□□□□ 0.76
HOXD9-201ENST00000249499 OR3A2P47893 321 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 FOXG1P55316 489 aaPredicted RBP19.82■□□□□ 0.76
HOXD9-201ENST00000249499 TAS2R31P59538 309 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 TSPAN5P62079 268 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 MALLQ13021 153 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 DHRS2Q13268 280 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 C9orf135Q5VTT2 229 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 TERB2Q8NHR7 220 aa19.82■□□□□ 0.76
HOXD9-201ENST00000249499 PLSCR5A0PG75 271 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 ZNF891A8MT65 544 aaPredicted RBP19.81■□□□□ 0.76
HOXD9-201ENST00000249499 GOSR2O14653 212 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 SLC22A5O76082 557 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 PMP2P02689 132 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 ID4P47928 161 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 H2BFSP57053 126 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 RAB1AP62820 205 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 LYG2Q86SG7 212 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 TMEM17Q86X19 198 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 FTMTQ8N4E7 242 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 ZSCAN4Q8NAM6 433 aaPredicted RBP19.81■□□□□ 0.76
HOXD9-201ENST00000249499 OR1K1Q8NGR3 316 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 OR5H2Q8NGV7 314 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 POM121L2Q96KW2 1035 aa19.81■□□□□ 0.76
HOXD9-201ENST00000249499 CACNA1AO00555 2505 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 HMSDA8MTL9 139 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 AMY2BP19961 511 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 ZBTB25P24278 435 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 PER3P56645 1201 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 PLCXD3Q63HM9 321 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 MOB3CQ70IA8 216 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 SLC23A1Q9UHI7 598 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 MYO7BQ6PIF6 2116 aa19.8■□□□□ 0.76
HOXD9-201ENST00000249499 C5orf49A4QMS7 147 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 OR2AT4A6NND4 320 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 CEACAM4O75871 244 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 HTR3BO95264 441 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 CD79AP11912 226 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 HLA-GP17693 338 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 SRSF4Q08170 494 aaKnown RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 PDZK1IP1Q13113 114 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 NSUN5P2Q63ZY6 315 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 CSNK2A3Q8NEV1 391 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 PLEKHJ1Q9NW61 149 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 PRSS50Q9UI38 385 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 EDARQ9UNE0 448 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 TOXO94900 526 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 HLA-AP01891 365 aaKnown RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 WT1P19544 449 aaPredicted RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 ZNF81P51508 661 aa19.79■□□□□ 0.76
HOXD9-201ENST00000249499 NOVA1P51513 510 aaKnown RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 SRSF6Q13247 344 aaKnown RBP19.79■□□□□ 0.76
HOXD9-201ENST00000249499 IKZF1Q13422 519 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms