RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SPDEFO95238 335 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 HPP00738 406 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 MGMTP16455 207 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 HTR5AP47898 357 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 MEOX2P50222 304 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 CAPZA1P52907 286 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 HLXQ14774 488 aaPredicted RBP13.78□□□□□ -0.2
LRFN1-201ENST00000248668 SGK3Q96BR1 496 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 LRRC46Q96FV0 321 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 TAAR9Q96RI9 348 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 NIT2Q9NQR4 276 aa13.78□□□□□ -0.2
LRFN1-201ENST00000248668 NOSIPQ9Y314 301 aaKnown RBP13.78□□□□□ -0.2
LRFN1-201ENST00000248668 A8MXK9 166 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 M0R296 226 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 SERPINA7P05543 415 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 S100A11P31949 105 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 CRIP3Q6Q6R5 217 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 BVESQ8NE79 360 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 OR2V1Q8NHB1 315 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 SPTSSAQ969W0 71 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 OR10A2Q9H208 303 aa13.77□□□□□ -0.2
LRFN1-201ENST00000248668 ZNF716A6NP11 495 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 EEF1E1-BLOC1S5C9J1V9 151 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 IGHEP01854 428 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 ECH1Q13011 328 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 RELL2Q8NC24 303 aaPredicted RBP13.77□□□□□ -0.21
LRFN1-201ENST00000248668 MFFQ9GZY8 342 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF701Q9NV72 531 aaPredicted RBP13.77□□□□□ -0.21
LRFN1-201ENST00000248668 MELTFP08582 738 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 TMEM225BP0DP42 221 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 FAM27BQ5VT28 67 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 NAXDQ8IW45 347 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 ARMC10Q8N2F6 343 aa13.77□□□□□ -0.21
LRFN1-201ENST00000248668 HDHD3Q9BSH5 251 aaPredicted RBP13.77□□□□□ -0.21
LRFN1-201ENST00000248668 TRAV14DV4A0A0A6YYC5 116 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 C13orf42A0A1B0GVH6 325 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 AMY2BP19961 511 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 CCNOP22674 350 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 C3AR1Q16581 482 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 BRICD5Q6PL45 260 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 GALNTL5Q7Z4T8 443 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 C6orf201Q7Z4U5 140 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 URM1Q9BTM9 101 aaKnown RBP13.76□□□□□ -0.21
LRFN1-201ENST00000248668 EDEM2Q9BV94 578 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 ALX4Q9H161 411 aaPredicted RBP13.76□□□□□ -0.21
LRFN1-201ENST00000248668 IL17BQ9UHF5 180 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 SVILO95425 2214 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF205O95201 554 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 CHRM2P08172 466 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 RNF224P0DH78 156 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 MTCP1P56278 107 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 MRPS34P82930 218 aaKnown RBP13.76□□□□□ -0.21
LRFN1-201ENST00000248668 PDCD1Q15116 288 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 REEP6Q96HR9 211 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
LRFN1-201ENST00000248668 A0A096LPE4 126 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 A0A1W2PPZ6 126 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 RP2O75695 350 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 S100A9P06702 114 aaKnown RBP13.75□□□□□ -0.21
LRFN1-201ENST00000248668 SPINK2P20155 84 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 GMFBP60983 142 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 SLC9A3R2Q15599 337 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 PDSS1Q5T2R2 415 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 ATP1A1-AS1Q5TC04 95 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 SLC16A14Q7RTX9 510 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 OR56B1Q8NGI3 324 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 FOXB1Q99853 325 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 GLS2Q9UI32 602 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 KLF2Q9Y5W3 355 aaPredicted RBP13.75□□□□□ -0.21
LRFN1-201ENST00000248668 KIAA1549Q9HCM3 1950 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 HOXA1P49639 335 aaPredicted RBP13.75□□□□□ -0.21
LRFN1-201ENST00000248668 ZNF546Q86UE3 836 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 CDH26Q8IXH8 852 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 ADAT1Q9BUB4 502 aaKnown RBP13.75□□□□□ -0.21
LRFN1-201ENST00000248668 CHST5Q9GZS9 411 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 LHX6Q9UPM6 363 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 C9orf170A2RU37 121 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 OR5H14A6NHG9 310 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 CCL2P13500 99 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 ZBTB25P24278 435 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 PSG4Q00888 419 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 FOXO1Q12778 655 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 ABHD17BQ5VST6 288 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 OR2W3Q7Z3T1 314 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 LYG2Q86SG7 212 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 CSNK2A3Q8NEV1 391 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 OR1F12Q8NHA8 337 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 KCNE4Q8WWG9 221 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 WNT2BQ93097 391 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 NTNG2Q96CW9 530 aa13.75□□□□□ -0.21
LRFN1-201ENST00000248668 HPNP05981 417 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CD59P13987 128 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 CTSSP25774 331 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 THBS4P35443 961 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 MAGEA5P43359 124 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 ATP1B3P54709 279 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 DHODHQ02127 395 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SLC25A42Q86VD7 318 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
LRFN1-201ENST00000248668 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms