RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SSX4O60224 188 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 CST4P01036 141 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 FGF9P31371 208 aaPredicted RBP9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 BMXP51813 675 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 ART1P52961 327 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 CAV3P56539 151 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 PARP16Q8N5Y8 322 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR51A2Q8NGJ7 313 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 PERPQ96FX8 193 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 PGLYRP3Q96LB9 341 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 SOX7Q9BT81 388 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 SELENOIQ9C0D9 397 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 STEAP1Q9UHE8 339 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 PEX16Q9Y5Y5 336 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 LRP5LA4QPB2 252 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF250P15622 560 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR52N4Q8NGI2 321 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR10K1Q8NGX5 313 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLAMF9Q96A28 289 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 YIPF6Q96EC8 236 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
TNFAIP3-201ENST00000237289 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 DEFB108AA8MXU0 73 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 AKR7A2O43488 359 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ACKR3P25106 362 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 GPR6P46095 362 aaPredicted RBP9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 EVX1P49640 407 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SFXN4Q6P4A7 337 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 COLCA1Q6ZS62 124 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR51D1Q8NGF3 324 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 UBASH3BQ8TF42 649 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 FAM3DQ96BQ1 224 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 NARFLQ9H6Q4 476 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 V9GYS6 101 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 DOPEY2Q9Y3R5 2298 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 J3QT63 122 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 LMX1BO60663 402 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 GABARAPO95166 117 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 CRYBB2P43320 205 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZCCHC24Q8N2G6 241 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 PLEKHJ1Q9NW61 149 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 GHRLQ9UBU3 117 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRBV5-5A0A0J9YX44 114 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SHISA9B4DS77 424 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 IFNL4K9M1U5 179 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SCGNO76038 276 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ARL6IP1Q15041 203 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ZNF404Q494X3 552 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SFRP4Q6FHJ7 346 aaPredicted RBP9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 C22orf34Q6ZV56 151 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 NDNFQ8TB73 568 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLC30A2Q9BRI3 323 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 UQCC2Q9BRT2 126 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 POFUT1Q9H488 388 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ABRACLQ9P1F3 81 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 PLEKHA6Q9Y2H5 1048 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRAV38-1A0A0B4J264 116 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SH2D1BO14796 132 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 DEGS1O15121 323 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 BPNT1O95861 308 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 CALCBP10092 127 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 PTGFRP43088 359 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 IL18Q14116 193 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 RDH5Q92781 318 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 ERGIC1Q969X5 290 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 SPSB4Q96A44 273 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 LYZL4Q96KX0 146 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 RNF167Q9H6Y7 350 aa9.51□□□□□ -0.89
TNFAIP3-201ENST00000237289 CD3GP09693 182 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLC2A2P11168 524 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 NKX6-1P78426 367 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 MADCAM1Q13477 382 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 RSPO1Q2MKA7 263 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 SLC36A1Q7Z2H8 476 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 TRAPPC6BQ86SZ2 158 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 TMEM185AQ8NFB2 350 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 MEGF10Q96KG7 1140 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 MYOZ1Q9NP98 299 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 CLEC2LP0C7M8 214 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 CPT2P23786 658 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 PDLIM4P50479 330 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 GNG2P59768 71 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 FAM131AQ6UXB0 335 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 BANF2Q9H503 90 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 LIN7BQ9HAP6 207 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 USF3Q68DE3 2245 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 FUOMA2VDF0 154 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 MCRIP1C9JLW8 97 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 H3BMQ9 156 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 NDUFB7P17568 137 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 TFF3Q07654 80 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 C15orf40Q8WUR7 153 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 OR5P3Q8WZ94 311 aa9.5□□□□□ -0.89
TNFAIP3-201ENST00000237289 RBM7Q9Y580 266 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms