RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 CD22P20273 847 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 EFNB2P52799 333 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 PMCHL1Q16048 86 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 HSD11B1LQ7Z5J1 315 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 ROBO4Q8WZ75 1007 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 NINJ1Q92982 152 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 KTI12Q96EK9 354 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-201ENST00000236192 A0A0U1RQF3 1178 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 ST6GAL1P15907 406 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 CST5P28325 142 aaPredicted RBP11.52□□□□□ -0.56
VAMP4-201ENST00000236192 SLC37A1P57057 533 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 TMEM267Q0VDI3 215 aaPredicted RBP11.52□□□□□ -0.56
VAMP4-201ENST00000236192 CNN3Q15417 329 aaKnown RBP11.52□□□□□ -0.56
VAMP4-201ENST00000236192 LDLRAD2Q5SZI1 272 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 C10orf91Q5T1B1 145 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 WDR74Q6RFH5 385 aaPredicted RBP11.52□□□□□ -0.56
VAMP4-201ENST00000236192 MARS2Q96GW9 593 aaKnown RBP11.52□□□□□ -0.56
VAMP4-201ENST00000236192 SGCZQ96LD1 299 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 SDF2Q99470 211 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 KCNIP2Q9NS61 270 aa11.52□□□□□ -0.56
VAMP4-201ENST00000236192 ONECUT2O95948 504 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 HAND1O96004 215 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 GLI4P10075 376 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 APCDD1LQ8NCL9 501 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 MRGPRDQ8TDS7 321 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 INSL5Q9Y5Q6 135 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 A0A1B0GTI1 187 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 B4GALT2O60909 372 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 FFAR4Q5NUL3 377 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 OR2AE1Q8NHA4 323 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 LANCL2Q9NS86 450 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 ENTPD2Q9Y5L3 495 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 R4GMQ9 66 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 BCL2P10415 239 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 APLNRP35414 380 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 EXOSC7Q15024 291 aaKnown RBP11.52□□□□□ -0.57
VAMP4-201ENST00000236192 DLK2Q6UY11 383 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 ZG16BQ96DA0 208 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 KLK13Q9UKR3 277 aa11.52□□□□□ -0.57
VAMP4-201ENST00000236192 RICTORQ6R327 1708 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 TMEM150CB9EJG8 249 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 EFSO43281 561 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 BSGP35613 385 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 SRSF5Q13243 272 aaKnown RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 TRMT12Q53H54 448 aaKnown RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 OR5D18Q8NGL1 313 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 C4orf45Q96LM5 186 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 PRAMEF25A6NGN4 478 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 PRAMEF4O60810 478 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 AMBPP02760 352 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 OR10J4P0C629 311 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 BRS3P32247 399 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 PPP1CCP36873 323 aaKnown RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 FGF8P55075 233 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 COX19Q49B96 90 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 WDR38Q5JTN6 314 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 OR8G2PQ6IF36 304 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 CMTM8Q8IZV2 173 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 NEIL1Q96FI4 390 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF160Q9HCG1 818 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 C20orf141Q9NUB4 165 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 PRSS47A8MTI9 375 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 C1QL1O75973 258 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 TBX6O95947 436 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 BTG2P78543 158 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 DUSP5Q16690 384 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 H1FOOQ8IZA3 346 aaPredicted RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 EPHX3Q9H6B9 360 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 MANBALQ9NQG1 85 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 PTPRFP10586 1907 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 EIF4E2O60573 245 aaKnown RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 RAMP1O60894 148 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 CLEC3BP05452 202 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 HIST1H1DP16402 221 aaKnown RBP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 TFPI2P48307 235 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 EWSR1Q01844 656 aaKnown RBP eCLIP11.51□□□□□ -0.57
VAMP4-201ENST00000236192 RPEL1Q2QD12 228 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 SYT13Q7L8C5 426 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
VAMP4-201ENST00000236192 SERPINE3A8MV23 424 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 BIVMQ86UB2 503 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 CYB5D2Q8WUJ1 264 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 LPAR4Q99677 370 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 PRTFDC1Q9NRG1 225 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 CDC14CA4D256 554 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 ZNF253O75346 499 aa11.5□□□□□ -0.57
VAMP4-201ENST00000236192 PSMB5P28074 263 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms