RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OR51F2Q8NH61 342 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 DVL3Q92997 716 aaPredicted RBP9.48□□□□□ -0.89
SF3B6-201ENST00000233468 C1orf159Q96HA4 380 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 ZNF184Q99676 751 aaPredicted RBP9.48□□□□□ -0.89
SF3B6-201ENST00000233468 ZNF649Q9BS31 505 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
SF3B6-201ENST00000233468 POLDIP2Q9Y2S7 368 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 PCDHGB5Q9Y5G0 923 aa9.48□□□□□ -0.89
SF3B6-201ENST00000233468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.48□□□□□ -0.89
SF3B6-201ENST00000233468 OR4C45A6NMZ5 311 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 PTGES3LE9PB15 166 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 LGALS8O00214 317 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 SLC1A7O00341 560 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 CDIPTO14735 213 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 FOXH1O75593 365 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 IGHV2-5P01817 119 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 CD2P06729 351 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 MUC1P15941 1255 aaPredicted RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 PRKACBP22694 351 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 PMELP40967 661 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 KIR3DL2P43630 455 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 FUT6P51993 359 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 NANOS3P60323 173 aaKnown RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 LMO4P61968 165 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 ZMYND11Q15326 602 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 MICBQ29980 383 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 DCDC5Q6ZRR9 648 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 GLCCI1Q86VQ1 547 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 RDH10Q8IZV5 341 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 SVOPQ8N4V2 548 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 OR13C3Q8NGS6 347 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 TSEN15Q8WW01 171 aaKnown RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 GATAD2BQ8WXI9 593 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 C12orf43Q96C57 262 aaKnown RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 CPNE2Q96FN4 548 aaPredicted RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 CNBD2Q96M20 576 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 MND1Q9BWT6 205 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 CHST5Q9GZS9 411 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 PATZ1Q9HBE1 687 aaKnown RBP9.47□□□□□ -0.89
SF3B6-201ENST00000233468 FKBP14Q9NWM8 211 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 DHDHQ9UQ10 334 aa9.47□□□□□ -0.89
SF3B6-201ENST00000233468 TRAV20A0A0B4J274 112 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OOEPA6NGQ2 149 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 LMX1BO60663 402 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 ZFPL1O95159 310 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 CYB5AP00167 134 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 CDK1P06493 297 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 MSMBP08118 114 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 RPS2P15880 293 aaKnown RBP9.46□□□□□ -0.9
SF3B6-201ENST00000233468 HNF1AP20823 631 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 THBS2P35442 1172 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 DVL1P1P54792 670 aaPredicted RBP9.46□□□□□ -0.9
SF3B6-201ENST00000233468 WNT4P56705 351 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 CDK5R1Q15078 307 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF404Q494X3 552 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 ESCO2Q56NI9 601 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 RBM48Q5RL73 367 aaKnown RBP9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OR2G6Q5TZ20 316 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 WDR82Q6UXN9 313 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 UTS2BQ765I0 119 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 SERPINA12Q8IW75 414 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 BOLLQ8N9W6 283 aaKnown RBP9.46□□□□□ -0.9
SF3B6-201ENST00000233468 SCCPDHQ8NBX0 429 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 DNAAF1Q8NEP3 725 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OR8B3Q8NGG8 313 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OR5D14Q8NGL3 314 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 GPR148Q8TDV2 347 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 HPSE2Q8WWQ2 592 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 THRSPQ92748 146 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 SPSB1Q96BD6 273 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 FGGYQ96C11 551 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 MSI2Q96DH6 328 aaKnown RBP9.46□□□□□ -0.9
SF3B6-201ENST00000233468 BORCS8Q96FH0 119 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OR8B2Q96RD0 313 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 CDCA4Q9BXL8 241 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM165Q9HC07 324 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 GPR173Q9NS66 373 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 TMEM160Q9NX00 188 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 ERVK-18Q9QC07 812 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 LPAR3Q9UBY5 353 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 CLEC2DQ9UHP7 191 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 LRCH1Q9Y2L9 728 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF281Q9Y2X9 895 aa9.46□□□□□ -0.9
SF3B6-201ENST00000233468 SVEP1Q4LDE5 3571 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 CEACAM18A8MTB9 384 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 H3BSH0 61 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 WNT9BO14905 357 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 MAGEB3O15480 346 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 OGG1O15527 345 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 RGS10O43665 173 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 LHBP01229 141 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 ZNF16P17020 682 aaPredicted RBP9.45□□□□□ -0.9
SF3B6-201ENST00000233468 GATA3P23771 443 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 C21orf33P30042 268 aaPredicted RBP9.45□□□□□ -0.9
SF3B6-201ENST00000233468 HAAOP46952 286 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 RBP2P50120 134 aa9.45□□□□□ -0.9
SF3B6-201ENST00000233468 NPY4RP50391 375 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms