RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ZNF266Q14584 549 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 OR1Q1Q15612 314 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 HLA-BQ31612 363 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 SPATA31B1PQ5VZV4 182 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 C19orf48Q6RUI8 117 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 GDPGP1Q6ZNW5 385 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 DPY19L4Q7Z388 723 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 ELOA3Q8NG57 546 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 FAM110DQ8TAY7 271 aaPredicted RBP7.4□□□□□ -1.23
SPARC-201ENST00000231061 CASTOR1Q8WTX7 329 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 ASB13Q8WXK3 278 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 ZBTB8AQ96BR9 441 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 MRAP2Q96G30 205 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 OR2M2Q96R28 347 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 MICU1Q9BPX6 476 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 EGLN3Q9H6Z9 239 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 SEMA4GQ9NTN9 838 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 NDUFB11Q9NX14 153 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 LRP12Q9Y561 859 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 V9GYH0 126 aa7.4□□□□□ -1.23
SPARC-201ENST00000231061 LAMA3Q16787 3333 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SMIM9A6NGZ8 99 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 K7EPK0 472 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 RBFOX2O43251 390 aaKnown RBP eCLIP7.39□□□□□ -1.23
SPARC-201ENST00000231061 LATO43561 262 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SDC2P34741 201 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 CNN1P51911 297 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 RPS25P62851 125 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 TAF13Q15543 124 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 MAPK14Q16539 360 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SYT14P1Q58G82 188 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 TMEM128Q5BJH2 165 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 UNQ5815/PRO19632Q6UWF5 114 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 HIST2H3AQ71DI3 136 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 FAM71E2Q8N5Q1 922 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 OR6T1Q8NGN1 323 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 OR4A16Q8NH70 328 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 APOBEC4Q8WW27 367 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 CMBLQ96DG6 245 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 KCTD7Q96MP8 289 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 CHIAQ9BZP6 476 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 RBFOX1Q9NWB1 397 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 JPT1Q9UK76 154 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 CASKO14936 926 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 MMP23AO75900 390 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF205O95201 554 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SEMA4FO95754 770 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SMIM10L1P0DMW3 83 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 CXCL3P19876 107 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ITGB7P26010 798 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 HTR2CP28335 458 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SLC16A1P53985 500 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 F2RL1P55085 397 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF79Q15937 498 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF750Q32MQ0 723 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF658BQ4V348 819 aaPredicted RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 TOMM20LQ6UXN7 152 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 GSG1LQ6UXU4 331 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 ABHD4Q8TB40 342 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 UPRTQ96BW1 309 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 SMIM10Q96HG1 83 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 GLIPR2Q9H4G4 154 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 PELI2Q9HAT8 420 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 APMAPQ9HDC9 416 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 THAP10Q9P2Z0 257 aaPredicted RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 FAM183AA6NL82 134 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 CPSF4LA6NMK7 179 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 RAD51DO75771 328 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 CCL5P13501 91 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 EPCAMP16422 314 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 INPP1P49441 399 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 PAFAH1B2P68402 229 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 GAGE5Q13069 117 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 GAGE6Q13070 117 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 GLYR1Q49A26 553 aaPredicted RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 ZNF730Q6ZMV8 503 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 MDGA2Q7Z553 956 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 OR11H7Q8NGC8 314 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 FNDC9Q8TBE3 224 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 LPAR4Q99677 370 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 FAIM2Q9BWQ8 316 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 TBC1D17Q9HA65 648 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 TBX21Q9UL17 535 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 TRAPPC4Q9Y296 219 aa7.39□□□□□ -1.23
SPARC-201ENST00000231061 HELZP42694 1942 aaKnown RBP7.39□□□□□ -1.23
SPARC-201ENST00000231061 A8MVM7 634 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 TMPRSS2O15393 492 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 EMC8O43402 210 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 SLC16A7O60669 478 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 DFFBO76075 338 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 UMODP07911 640 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 ACP5P13686 325 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 AVPR1BP47901 424 aa7.38□□□□□ -1.23
SPARC-201ENST00000231061 BCL2L15Q5TBC7 163 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms