RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SSTR2P30874 369 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 GPM6AP51674 278 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 MTCP1P56278 107 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 CAV3P56539 151 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 ZNF154Q13106 437 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 PCGF3Q3KNV8 242 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 SFXN4Q6P4A7 337 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 ASCL4Q6XD76 172 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 ZNF573Q86YE8 665 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 CALHM1Q8IU99 346 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 CROCCP3Q8IVE0 287 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 C11orf53Q8IXP5 236 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 ZCCHC24Q8N2G6 241 aaKnown RBP11.9□□□□□ -0.5
SEC61B-201ENST00000223641 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
SEC61B-201ENST00000223641 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 CNTD2Q9H8S5 307 aa11.9□□□□□ -0.5
SEC61B-201ENST00000223641 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 FBN2P35556 2912 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 SMIM30A4D0T7 59 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 LRP5LA4QPB2 252 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 H7C417 338 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 ACAA1P09110 424 aaPredicted RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 BMP4P12644 408 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 ZNF182P17025 639 aaPredicted RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 TNFSF4P23510 183 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 SRP9P49458 86 aaKnown RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 PDZK1IP1Q13113 114 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 SPRNQ5BIV9 151 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 TMEM200AQ86VY9 491 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 ZSCAN4Q8NAM6 433 aaPredicted RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 OR4D6Q8NGJ1 314 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 OR6M1Q8NGM8 313 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
SEC61B-201ENST00000223641 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 OR2V2Q96R30 315 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 PKIBQ9C010 78 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 DYNLRB1Q9NP97 96 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 LAMP3Q9UQV4 416 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 PMF1-BGLAPU3KQ54 211 aa11.89□□□□□ -0.51
SEC61B-201ENST00000223641 TANC2Q9HCD6 1990 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 HTR2CP28335 458 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 CFHR2P36980 270 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 PTGFRP43088 359 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 HAAOP46952 286 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 RORCP51449 518 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 IL24Q13007 206 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 HNRNPA0Q13151 305 aaKnown RBP11.88□□□□□ -0.51
SEC61B-201ENST00000223641 TESK1Q15569 626 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 MPPED2Q15777 294 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 C1QL2Q7Z5L3 287 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 ANGPTL5Q86XS5 388 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 SAXO1Q8IYX7 474 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 PNLDC1Q8NA58 520 aaKnown RBP11.88□□□□□ -0.51
SEC61B-201ENST00000223641 SCCPDHQ8NBX0 429 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 Q8NFD4 153 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 ITLN1Q8WWA0 313 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 AQP3Q92482 292 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 ERGIC1Q969X5 290 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 RFT1Q96AA3 541 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 NKX3-1Q99801 234 aaPredicted RBP11.88□□□□□ -0.51
SEC61B-201ENST00000223641 SLIRPQ9GZT3 109 aaKnown RBP11.88□□□□□ -0.51
SEC61B-201ENST00000223641 CCDC59Q9P031 241 aaKnown RBP11.88□□□□□ -0.51
SEC61B-201ENST00000223641 STEAP1Q9UHE8 339 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 CACNA1DQ01668 2161 aa11.88□□□□□ -0.51
SEC61B-201ENST00000223641 J3QT63 122 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 GRPP07492 148 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 SLC2A2P11168 524 aaPredicted RBP11.87□□□□□ -0.51
SEC61B-201ENST00000223641 TNFRSF1AP19438 455 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 RANBP1P43487 201 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 OR3A4PP47883 348 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 CCL8P80075 99 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 DYNC1I2Q13409 638 aaKnown RBP11.87□□□□□ -0.51
SEC61B-201ENST00000223641 CNPY1Q3B7I2 92 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 PRAMEF6Q5VXH4 476 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 HAGHLQ6PII5 290 aaPredicted RBP11.87□□□□□ -0.51
SEC61B-201ENST00000223641 Q8TCH9 128 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
SEC61B-201ENST00000223641 GPER1Q99527 375 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 MRI1Q9BV20 369 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 CACNG6Q9BXT2 260 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 EGLN1Q9GZT9 426 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 NXF2Q9GZY0 626 aaKnown RBP11.87□□□□□ -0.51
SEC61B-201ENST00000223641 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 GCM1Q9NP62 436 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 GHRLQ9UBU3 117 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 DAPK2Q9UIK4 370 aa11.87□□□□□ -0.51
SEC61B-201ENST00000223641 IGKV1-12A0A0C4DH73 117 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 CDIPTO14735 213 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 SYNGR1O43759 233 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 NOS1APO75052 506 aaPredicted RBP11.86□□□□□ -0.51
SEC61B-201ENST00000223641 IGKV1D-12P01611 117 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 CALCBP10092 127 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 SOX6P35712 828 aa11.86□□□□□ -0.51
SEC61B-201ENST00000223641 PMELP40967 661 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms