RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 FOXJ2Q9P0K8 574 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 CCDC187A0A096LP49 1063 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 A0A1W2PNU3 283 aaPredicted RBP19.42■□□□□ 0.7
CCDC9-201ENST00000221922 LRRC3CA6NJW4 275 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 DEFA5Q01523 94 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 FAM27BQ5VT28 67 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 Q6ZSR3 168 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 PSMF1Q92530 271 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 DCUN1D4Q92564 292 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 ARHGAP5-AS1Q96IT6 56 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 GPR87Q9BY21 358 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCDC9-201ENST00000221922 PLEK2Q9NYT0 353 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 IGKV1-9A0A0C4DH69 117 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 A0A1W2PP11 408 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 M0R135 149 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 SIGLEC5O15389 551 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 KCNAB3O43448 404 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 MTRF1O75570 445 aaKnown RBP19.41■□□□□ 0.7
CCDC9-201ENST00000221922 LYL1P12980 280 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 FPR2P25090 351 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 NPY4RP50391 375 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 TMEM164Q5U3C3 297 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 YRDCQ86U90 279 aaKnown RBP19.41■□□□□ 0.7
CCDC9-201ENST00000221922 LHFPL1Q86WI0 220 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 ZNF799Q96GE5 643 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 SCGB3A2Q96PL1 93 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 MRPS18CQ9Y3D5 142 aaKnown RBP19.41■□□□□ 0.7
CCDC9-201ENST00000221922 NCOR1O75376 2440 aa19.41■□□□□ 0.7
CCDC9-201ENST00000221922 C21orf140B9A014 251 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 E9PLN8 166 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 CRTAPO75718 401 aaPredicted RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 TPT1P13693 172 aaKnown RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 ALDH3B1P43353 468 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 CYB561P49447 251 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 CARD18P57730 90 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 CLEC18BQ6UXF7 455 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 RRNAD1Q96FB5 475 aaKnown RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 NKX6-2Q9C056 277 aaPredicted RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 CYTL1Q9NRR1 136 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 H0YIZ8 118 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 TSPAN9O75954 239 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 SUPT4H1P63272 117 aaKnown RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 ZNF169Q14929 603 aaPredicted RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 KISS1Q15726 138 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 OR5H2Q8NGV7 314 aa19.4■□□□□ 0.7
CCDC9-201ENST00000221922 RTBDNQ9BSG5 229 aaPredicted RBP19.4■□□□□ 0.7
CCDC9-201ENST00000221922 FOXI3A8MTJ6 420 aaPredicted RBP19.39■□□□□ 0.69
CCDC9-201ENST00000221922 TERTO14746 1132 aaKnown RBP19.39■□□□□ 0.69
CCDC9-201ENST00000221922 MT-CO3P00414 261 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 CD79AP11912 226 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 GGNQ86UU5 652 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 BAP18Q8IXM2 172 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 GPR137CQ8N3F9 429 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 ZSCAN4Q8NAM6 433 aaPredicted RBP19.39■□□□□ 0.69
CCDC9-201ENST00000221922 CHST5Q9GZS9 411 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 OR10A2Q9H208 303 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 R4GN57 208 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 NCKAP5O14513 1909 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 FAM74A7A6NL05 159 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 ABCD4O14678 606 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 ATG12O94817 140 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 PTGFRP43088 359 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 RAB35Q15286 201 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 RSPO1Q2MKA7 263 aaPredicted RBP19.39■□□□□ 0.69
CCDC9-201ENST00000221922 FAM74A3Q4VXF1 159 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 PDSS1Q5T2R2 415 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 NSUN5P2Q63ZY6 315 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 CRIP3Q6Q6R5 217 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 CLRN3Q8NCR9 226 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 SLC6A15Q9H2J7 730 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 ASF1BQ9NVP2 202 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 OSGIN2Q9Y236 505 aa19.39■□□□□ 0.69
CCDC9-201ENST00000221922 GPR179Q6PRD1 2367 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 TMEM218A2RU14 115 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 C5orf63A6NC05 138 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 PABPC1L2AQ5JQF8 200 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 AADACL3Q5VUY0 350 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 OR13G1Q8NGZ3 307 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 FBXO17Q96EF6 278 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 NARS2Q96I59 477 aaKnown RBP19.38■□□□□ 0.69
CCDC9-201ENST00000221922 CYYR1Q96J86 154 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 DEPPQ9NTK1 212 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 PCDHGA1Q9Y5H4 931 aa19.38■□□□□ 0.69
CCDC9-201ENST00000221922 CST2P09228 141 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 RFPL3SP0C7P2 107 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 NAT2P11245 290 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 AMY2BP19961 511 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 ARFRP1Q13795 201 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 PRSS54Q6PEW0 395 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 DRAM2Q6UX65 266 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 OR5T2Q8NGG2 359 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 OR2V1Q8NHB1 315 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 THOC3Q96J01 351 aaKnown RBP19.37■□□□□ 0.69
CCDC9-201ENST00000221922 PIGLQ9Y2B2 252 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 ADAP1O75689 374 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 ZNF806P0C7X5 589 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 FAHP16930 419 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 ARHGDIBP52566 201 aa19.37■□□□□ 0.69
CCDC9-201ENST00000221922 SLC9A3R2Q15599 337 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms