RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ACER3Q9NUN7 267 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 WRAP73Q9P2S5 460 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CACNG5Q9UF02 275 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 WSB1Q9Y6I7 421 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 K7EQS6 105 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GOSR1O95249 250 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SMUG1Q53HV7 270 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 USP53Q70EK8 1073 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LRP10Q7Z4F1 713 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 C20orf196Q8IYI0 205 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MRPL43Q8N983 215 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NTN4Q9HB63 628 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MTCH1Q9NZJ7 389 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ZFP30Q9Y2G7 519 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ARHGAP21Q5T5U3 1957 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HOXA6P31267 233 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 RPL30P62888 115 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HYAL1Q12794 435 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GAMTQ14353 236 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NNATQ16517 81 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 OR52N5Q8NH56 324 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ZC3HAV1LQ96H79 300 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SAP30LQ9HAJ7 183 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ST3GAL6Q9Y274 331 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF785A8K8V0 405 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ALOX12BO75342 701 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HOXD4P09016 255 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF17P17021 662 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NTF3P20783 257 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 PPP1CCP36873 323 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NHLH1Q02575 133 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NHLH2Q02577 135 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HIST3H3Q16695 136 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MICBQ29980 383 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TMEM81Q6P7N7 255 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 PDPNQ86YL7 162 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LRFN3Q9BTN0 628 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SMIM3Q9BZL3 60 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SLC17A4Q9Y2C5 497 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LDB3O75112 727 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CA3P07451 260 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 INHBBP09529 407 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ALDOCP09972 364 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SFTA3P0C7M3 94 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 VDAC1P21796 283 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 HOXD9P28356 352 aaPredicted RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CD70P32970 193 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 OR1N1Q8NGS0 311 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 OR13G1Q8NGZ3 307 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ELSPBP1Q96BH3 223 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 URGCP-MRPS24S4R325 110 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 ARL2-SNX15V9GYD0 113 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 KCNE1BA0A087WTH5 132 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 A0A1W2PPQ1 181 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 LNP1A1A4G5 178 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MFSD2BA6NFX1 497 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CXorf1O96002 111 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 MMP11P24347 488 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SLC6A1P30531 599 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 CCR2P41597 374 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 SELENOTP62341 195 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 OR1C1Q15619 314 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 GLIS1Q8NBF1 620 aa5.49□□□□□ -1.53
VPS13D-201ENST00000011700 TOE1Q96GM8 510 aaKnown RBP5.49□□□□□ -1.53
VPS13D-201ENST00000011700 NYNRINQ9P2P1 1898 aaKnown RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 NDUFB6O95139 128 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 ALOX5APP20292 161 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 OR10J1P30954 320 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 GJA5P36382 358 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 SLAMF6Q96DU3 332 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 NMNAT3Q96T66 252 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 PROCRQ9UNN8 238 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 KIAA1549Q9HCM3 1950 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 A0A1B0GU03 582 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 CDRT15L2A8MXV6 281 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 MKRN2OSH3BPM6 223 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 GFYI3L273 518 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 CTSDP07339 412 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 GLRA1P23415 457 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 EPHA2P29317 976 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 EDDM3BP56851 147 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 FAM26DQ5JW98 314 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 C6orf132Q5T0Z8 1188 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 FAM71E1Q6IPT2 247 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 PTDSS2Q9BVG9 487 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 TECRQ9NZ01 308 aaKnown RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 MBD1Q9UIS9 605 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 DAPP1Q9UN19 280 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 hADV38S2A0JD32 116 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 GJB5O95377 273 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF738Q8NE65 137 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 OR10AD1Q8NGE0 317 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 MS4A10Q96PG2 267 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 ZNF2Q9BSG1 426 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-201ENST00000011700 CTSFQ9UBX1 484 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 OR51H1Q8NH63 302 aa5.48□□□□□ -1.53
VPS13D-201ENST00000011700 OR1L3Q8NH93 324 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms