RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Q80Y39 304 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Fbxl14Q8BID8 400 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Slc31a1Q8K211 196 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr1298Q8VGE6 312 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr338Q8VGK6 306 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Lypd6bQ9D7F2 191 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 StrapQ9Z1Z2 350 aaKnown RBP9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 L3mbtl4B1B1A0 621 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr574F8VQ18 346 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Cdk5r1P61809 307 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 EndouQ3V188 412 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 H2-M10.5Q85ZW7 330 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Irf2bp1Q8R3Y8 584 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 ShpkQ9D5J6 476 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr1338A2ACY7 313 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gm8882E9Q7E4 283 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gm8677K9J7G9 307 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Tmem64Q3U145 381 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr1222Q7TR02 311 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr452Q7TRV8 317 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Map6Q7TSJ2 906 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr38Q8VGP4 317 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Mrps18bQ99N84 254 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Atp5sQ9CRA7 200 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Golt1aQ9DCQ3 133 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Spint2Q9WU03 252 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr568E9Q554 313 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 St8sia2O35696 375 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Hprt1P00493 218 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 B4galnt2Q09199 510 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Muc20Q8BUE7 656 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr1451Q8VFX5 310 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Plrg1Q922V4 513 aaKnown RBP9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Tmem30cQ9D4D7 342 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Shank3Q4ACU6 1730 aa9.53□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr587-ps1A0A1B0GSS1 159 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gm13285B1AYI3 182 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gm13275B1AYI8 182 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Klk1b9P15949 261 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 IfnzQ8BQT1 182 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gm13278Q8CD73 182 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Dtd1Q9DD18 209 aaKnown RBP9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Chrnb2Q9ERK7 501 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr1089A0A1L1SRK6 311 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Hoxc5P32043 222 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Jmjd8Q3TA59 316 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr923Q7TRB9 317 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr884Q7TRE1 309 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Gprin3Q8BWS5 763 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 RfesdQ8K2P6 157 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr229Q8VFN5 307 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Cysltr2Q920A1 309 aa9.52□□□□□ -0.88
Scn8a-201ENSMUST00000082209 Olfr59B1ARL3 323 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gm4177D3YTX5 305 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr914E9PW59 316 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Vmn1r103K7N6X7 305 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Vmn1r151L7N288 305 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 P01669 111 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Nkx2-6P43688 289 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gm826Q3UQ74 109 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Mob1bQ8BPB0 216 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Ythdf2Q91YT7 579 aaKnown RBP9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Plekha3Q9ERS4 297 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Cldn12Q9ET43 244 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Heatr5bQ8C547 2070 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr110A2RT31 317 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Pira2F8VQ94 680 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Adam10O35598 749 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Mtatp6P00848 226 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Slc2a1P17809 492 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Folr1P35846 255 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 ErhP84089 104 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr125Q14AJ9 320 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Tle1Q62440 770 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr111Q7TRK1 317 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Slc26a11Q80ZD3 593 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gpr137Q80ZU9 396 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Rnf32Q9JIT1 368 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Bcl3Q9Z2F6 448 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Lrit3W8DXL4 681 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr228A0A1L1SR98 313 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 S100a10P08207 97 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Il1r1P13504 576 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 SrgnP13609 152 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 H2-T3P14432 384 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Timm8bP62077 83 aaKnown RBP9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gbx1P82976 418 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gm1527Q3V0P3 650 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Olfr728Q7TRM6 311 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Defb22Q8BVC1 179 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Txnl1Q8CDN6 289 aaKnown RBP9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Flywch1Q8CI03 673 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Gtf2h5Q8K2X8 71 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Calhm2Q8VEC4 323 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Mrps24Q9CQV5 167 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Ogfod3Q9D136 315 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Nprl2Q9WUE4 380 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Mapk7Q9WVS8 806 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Pi4kaE9Q3L2 2105 aa9.52□□□□□ -0.89
Scn8a-201ENSMUST00000082209 Igkv5-45A0A0B4J1J1 115 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms