RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gm10662Q3UT86 313 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1216Q7TR05 311 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1115Q7TR53 326 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr995Q8VF74 315 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Arl4dQ99PE9 201 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ogfod3Q9D136 315 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Cnot1Q6ZQ08 2375 aaKnown RBP14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 D7Ertd443eD2J0Y4 644 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gprin2D3Z1D7 455 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Cpeb1P70166 561 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm1123Q1RME4 390 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rcor3Q6PGA0 451 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Prss43Q76HL1 382 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 P2rx2Q8K3P1 485 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1044Q8VGR9 314 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Dusp22Q99N11 184 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Kcne4Q9WTW3 170 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Abhd16aQ9Z1Q2 558 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 P01661 131 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 P01662 111 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 P01663 111 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 PipP02816 146 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Znf271P15620 580 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 MestQ07646 335 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr967Q7TRA6 310 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr527Q7TRT9 305 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Nsun5Q8K4F6 465 aaKnown RBP14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 MtfmtQ9D799 386 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Riox1Q9JJF3 603 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Clec6aQ9JKF4 209 aa14.51□□□□□ -0.09
Trim28-201ENSMUST00000005705 Col6a6Q8C6K9 2265 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 BC035044E0CXF8 138 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 ActbP60710 375 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Actg1P63260 375 aaKnown RBP14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Fndc4Q3TR08 231 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tmem150cQ8C8S3 249 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr434Q8VF17 321 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1254Q8VFB1 314 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Bola1Q9D8S9 137 aaKnown RBP14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Alg2Q9DBE8 415 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 AspdhQ9DCQ2 287 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Lime1Q9EQR5 269 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Shank1D3YZU1 2167 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Birc7A2AWP0 285 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 H2-T10F6T1I5 379 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 DhodhO35435 395 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gfi1bO70237 330 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Wnt1P04426 370 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Taar8cQ5QD05 344 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 NagpaQ8BJ48 517 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Nob1Q8BW10 403 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Dusp18Q8VE01 188 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1423Q8VFV0 310 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Pttg1Q9CQJ7 199 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 D10Wsu102eQ9CX66 185 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 H2afb3S4R1G7 115 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Dock4P59764 1978 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Cacna1iE9Q7P2 2199 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Wnk2Q3UH66 2149 aa14.5□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zfp961E9Q4R5 444 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Psmb1O09061 240 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ccr6O54689 367 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ikzf2P81183 526 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Tnfrsf26P83626 204 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr661Q99NH4 319 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 4933400A11RikQ9CR52 288 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Trappc6bQ9D289 158 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 4933402D24RikQ9D4D3 167 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Cldn13Q9Z0S4 211 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Vmn1r82A0A087WRV1 305 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Obp1bA2AEP0 171 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm14743A2BHD2 171 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Rhox3gB9EJQ9 160 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Stc2O88452 296 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Hoxb1P17919 297 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ypel5P62700 121 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Mpzl1Q3TEW6 270 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 CcnqQ8QZR8 250 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr410Q8VFX7 315 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr402Q8VFX8 315 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Nop16Q9CPT5 178 aaKnown RBP14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Bbs10Q9DBI2 713 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Actl6aQ9Z2N8 429 aaKnown RBP14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr239A0PK55 315 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Fndc7A2AED3 737 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm15737D3YZR0 106 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr55K7N6Q1 315 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr1564K7N6V7 318 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Fbxw15L7N1X6 466 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Zfp955bL7N232 545 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Ccl20O89093 97 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Hoxc4Q08624 264 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr90Q0VEL5 310 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Lyg2Q3V1I0 213 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 RhofQ8BYP3 211 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Elovl7Q9D2Y9 281 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 2900055J20RikQ9D6G3 140 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Olfr632Q9EPN9 317 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Actr10Q9QZB7 417 aa14.49□□□□□ -0.09
Trim28-201ENSMUST00000005705 Gm4858A0A0A6YWS7 318 aa14.48□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms