RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ACTBL2Q562R1 376 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 RPL7L1Q6DKI1 246 aaKnown RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 LCN10Q6JVE6 187 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 Q7L0L9 218 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 DOK3Q7L591 496 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 C2orf50Q96LR7 162 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 URM1Q9BTM9 101 aaKnown RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CHRDQ9H2X0 955 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 AKIRIN1Q9H9L7 192 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 MMP26Q9NRE1 261 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 PLA2G2EQ9NZK7 142 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 LPAR3Q9UBY5 353 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 VPS13AQ96RL7 3174 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 HPNP05981 417 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 NFYBP25208 207 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 PJVKQ0ZLH3 352 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 WDSUB1Q8N9V3 476 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 OR2M3Q8NG83 312 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 MYO7BQ6PIF6 2116 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 F5H5K5 113 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 MBTPS2O43462 519 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 MUC1P15941 1255 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-233ENST00000642021 SERPINA2P20848 420 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 S100A10P60903 97 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 ACY1Q03154 408 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 RSPO1Q2MKA7 263 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-233ENST00000642021 PHYHD1Q5SRE7 291 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-233ENST00000642021 OR2A2Q6IF42 318 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 WDR74Q6RFH5 385 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-233ENST00000642021 GALNTL5Q7Z4T8 443 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 OXGR1Q96P68 337 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 OR6C1Q96RD1 312 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 PECRQ9BY49 303 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-233ENST00000642021 B3GALT1Q9Y5Z6 326 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 DMDP11532 3685 aa12.14□□□□□ -0.47
PHGDH-233ENST00000642021 LRP3O75074 770 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 SFTPBP07988 381 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 FAHP16930 419 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 MSX1P28360 303 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PTGER4P35408 488 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 LPAR6P43657 344 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PRAMEF20Q5VT98 475 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 ADAMTS17Q8TE56 1095 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 MLXQ9UH92 298 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 OR5H15A6NDH6 313 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF726A6NNF4 738 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 SERPINA5P05154 406 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PRF1P14222 555 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-233ENST00000642021 ID4P47928 161 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 AKR1D1P51857 326 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 CLDN17P56750 224 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 KCNMB1Q16558 191 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 C6orf201Q7Z4U5 140 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 KMT5CQ86Y97 462 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 ADPRHL1Q8NDY3 354 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 PGAM5Q96HS1 289 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
PHGDH-233ENST00000642021 MCTS1Q9ULC4 181 aaKnown RBP12.13□□□□□ -0.47
PHGDH-233ENST00000642021 DHRS7CA6NNS2 312 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 C9JQL5 133 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 MSTNO14793 375 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 HKR1P10072 659 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 RPL35P42766 123 aaKnown RBP12.13□□□□□ -0.47
PHGDH-233ENST00000642021 ECH1Q13011 328 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 SMIM8Q96KF7 97 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
PHGDH-233ENST00000642021 FRYLO94915 3013 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ADAMTS9Q9P2N4 1935 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 AGPAT2O15120 278 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 DBHP09172 617 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 SRFP11831 508 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF708P17019 499 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 NME2P22392 152 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 CPEB2Q7Z5Q1 589 aaKnown RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 OR5L2Q8NGL0 311 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 PIGTQ969N2 578 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 SCGB3A2Q96PL1 93 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 SEC11CQ9BY50 192 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF701Q9NV72 531 aaPredicted RBP12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF581Q9P0T4 197 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 AQP7P3A6NL99 342 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 SCRG1O75711 98 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZFAND5O76080 213 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 ZNF205O95201 554 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 FCGR2AP12318 317 aa12.12□□□□□ -0.47
PHGDH-233ENST00000642021 IL34Q6ZMJ4 242 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms