RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 CENPXA8MT69 81 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 POLR1CO15160 346 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 LCA5LO95447 670 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 CYB5R3P00387 301 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 PTHP01270 115 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 TRBC1P01850 177 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 IVDP26440 423 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 APLNRP35414 380 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 GDI2P50395 445 aaKnown RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 PSMD4P55036 377 aaKnown RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 ELF3P78545 371 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 NAB1Q13506 487 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 MFSD14CQ5VZR4 134 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 C16orf87Q6PH81 154 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 SPINT4Q6UDR6 99 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 MDP1Q86V88 176 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 SLC30A8Q8IWU4 369 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 TMEM105Q8N8V8 129 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 WDR31Q8NA23 367 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 OR5T3Q8NGG3 340 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 CDS1Q92903 461 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 RERGQ96A58 199 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 S100PBPQ96BU1 408 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 NUDT9Q9BW91 350 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 SFXN3Q9BWM7 321 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 FANCEQ9HB96 536 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 DYRK4Q9NR20 520 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 HEBP1Q9NRV9 189 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 ZMAT5Q9UDW3 170 aaKnown RBP1.88□□□□□ -2.11
CCDC7-216ENST00000640058 KLF12Q9Y4X4 402 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 LRRC42Q9Y546 428 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 KIAA1671Q9BY89 1806 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 SBNO1A3KN83 1393 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 JCADQ9P266 1359 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 IGHV3OR16-8A0A075B7F1 116 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 IGHV6-1A0A0B4J1U7 121 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 A0A1W2PPV4 95 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF878C9JN71 531 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 KDELR3O43731 214 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 UPK1BO75841 260 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 GATBO75879 557 aaKnown RBP1.87□□□□□ -2.11
CCDC7-216ENST00000640058 TTC4O95801 387 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 GCGP01275 180 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 NELFEP18615 380 aaKnown RBP1.87□□□□□ -2.11
CCDC7-216ENST00000640058 PSMB5P28074 263 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 ERFP50548 548 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 BCAP31P51572 246 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 CCNG1P51959 295 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 INCA1Q0VD86 236 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 CAVIN4Q5BKX8 364 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 MLIPQ5VWP3 458 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 KIF27Q86VH2 1401 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 FBXO36Q8NEA4 188 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 C1orf64Q8NEQ6 169 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 OR10Z1Q8NGY1 313 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 KLF14Q8TD94 323 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-216ENST00000640058 TCP10LQ8TDR4 215 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 DCAKDQ8WVC6 231 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 RXFP2Q8WXD0 754 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 TMEM234Q8WY98 164 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 IP6K3Q96PC2 410 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 ANGPTL4Q9BY76 406 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 ARV1Q9H2C2 271 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 KIR3DX1Q9H7L2 352 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 LTBP4Q8N2S1 1624 aa1.87□□□□□ -2.11
CCDC7-216ENST00000640058 OTOGLQ3ZCN5 2332 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 TICRRQ7Z2Z1 1910 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF98A6NK75 572 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 BTNL10A8MVZ5 291 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 M0R1X1 148 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 DFFAO00273 331 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 MANBAO00462 879 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 ETHE1O95571 254 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 HSPD1P10809 573 aaKnown RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 NTF3P20783 257 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 HCCSP53701 268 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 CMC4P56277 68 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 RBX1P62877 108 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 PAFAH1B2P68402 229 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 PRKCDQ05655 676 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 DEGS2Q6QHC5 323 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 SLC25A29Q8N8R3 303 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 APCDD1LQ8NCL9 501 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 OR52K1Q8NGK4 314 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 OR5M1Q8NGP8 315 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 TFGQ92734 400 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 KIAA1143Q96AT1 154 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 ZFP3Q96NJ6 502 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 TMEM175Q9BSA9 504 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 SHANK2-AS3Q9BTD1 123 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 DHX35Q9H5Z1 703 aaKnown RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 ARMC7Q9H6L4 198 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 FARSAQ9Y285 508 aaKnown RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 CACNA1DQ01668 2161 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 PRR14LQ5THK1 2151 aa1.86□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF608Q9ULD9 1512 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-216ENST00000640058 IGHV2OR16-5A0A0B4J2B6 119 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 GMDSO60547 372 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 CCDC22O60826 627 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms