RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 ARRDC1Q8N5I2 433 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 ZPLD1Q8TCW7 415 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TRMT61AQ96FX7 289 aaKnown RBP12.78□□□□□ -0.36
SCARB2-208ENST00000638372 MARVELD1Q9BSK0 173 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 ARID2Q68CP9 1835 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 OGG1O15527 345 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 GMDSO60547 372 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 FUT3P21217 361 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 RAB35Q15286 201 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 GSG1Q2KHT4 349 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 GAB4Q2WGN9 574 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 ALKBH6Q3KRA9 238 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF766Q5HY98 468 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM91Q6ZNR0 172 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TCFL5Q9UL49 500 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 DOCK6Q96HP0 2047 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 JTBO76095 146 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 MSL3P1P0C860 447 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 CCL3P10147 92 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 OR3A4PP47883 348 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 EIF3IQ13347 325 aaKnown RBP12.77□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF770Q6IQ21 691 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-208ENST00000638372 EXTL1Q92935 676 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 TM4SF19Q96DZ7 209 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 PRSS27Q9BQR3 290 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 PIGMQ9H3S5 423 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 V9GYH0 126 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 LIPT2A6NK58 231 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 OR4C45A6NMZ5 311 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 SEMG1P04279 462 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 SRD5A2P31213 254 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 FAM185AQ8N0U4 392 aa12.77□□□□□ -0.36
SCARB2-208ENST00000638372 MUC20Q8N307 709 aaPredicted RBP12.77□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF768Q9H5H4 540 aaKnown RBP12.77□□□□□ -0.36
SCARB2-208ENST00000638372 DFFBO76075 338 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 HIST1H1DP16402 221 aaKnown RBP12.77□□□□□ -0.37
SCARB2-208ENST00000638372 SSBP1Q04837 148 aaKnown RBP12.77□□□□□ -0.37
SCARB2-208ENST00000638372 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 HES3Q5TGS1 186 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 FAM122BQ7Z309 247 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 GPX8Q8TED1 209 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 FAAP24Q9BTP7 215 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 EGLN1Q9GZT9 426 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 RPH3ALQ9UNE2 315 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 TRAV8-7A0A075B6U6 113 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 A0A1W2PQD3 144 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 SELEP16581 610 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 MEOX1P50221 254 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 DHRS2Q13268 280 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
SCARB2-208ENST00000638372 ADPRHL1Q8NDY3 354 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-208ENST00000638372 C2orf50Q96LR7 162 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 UQCC2Q9BRT2 126 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 TMPRSS13Q9BYE2 586 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 SIRT4Q9Y6E7 314 aaPredicted RBP12.77□□□□□ -0.37
SCARB2-208ENST00000638372 ATP23Q9Y6H3 246 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 URGCP-MRPS24S4R325 110 aa12.77□□□□□ -0.37
SCARB2-208ENST00000638372 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 HTD2P86397 168 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 CMTM3Q96MX0 182 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 UCN2Q96RP3 112 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 NKX6-3A6NJ46 265 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 H2AFB1P0C5Y9 115 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 IFITM3Q01628 133 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 TMPRSS7Q7RTY8 843 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 DUSP15Q9H1R2 295 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 MDC1Q14676 2089 aaKnown RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 IAPPP10997 89 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 ADRA2CP18825 462 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 ARL3P36405 182 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 BRCA1P38398 1863 aaKnown RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 RAC3P60763 192 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 OR6X1Q8NH79 312 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 CT55Q8WUE5 264 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 INTS1Q8N201 2190 aaKnown RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 C17orf112F2Z3M2 114 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 IL5P05113 134 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 SELENOPP49908 381 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 RPS23P62266 143 aaKnown RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 RAB11AP62491 216 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 Q6ZRG5 221 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 OR8B12Q8NGG6 310 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 OR8U1Q8NH10 309 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 ASB10Q8WXI3 467 aa12.76□□□□□ -0.37
SCARB2-208ENST00000638372 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
SCARB2-208ENST00000638372 LGALS8O00214 317 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 SCO1O75880 301 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 SLC6A1P30531 599 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 PPP1R1AQ13522 171 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 PLA1AQ53H76 456 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 LCN15Q6UWW0 184 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 SLC35G3Q8N808 338 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 ST8SIA2Q92186 375 aa12.75□□□□□ -0.37
SCARB2-208ENST00000638372 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms