RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 LOC110117498-PIK3R3F6TDL0 507 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 AKR7A2O43488 359 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 MITFO75030 526 aaPredicted RBP15.68■□□□□ 0.1
CLN6-221ENST00000637494 MMP9P14780 707 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 GLRA1P23415 457 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 CXCR4P61073 352 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 CEACAM21Q3KPI0 293 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 CDONQ4KMG0 1287 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 FAM76BQ5HYJ3 339 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 ZBTB37Q5TC79 503 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 RUSC1-AS1Q66K80 236 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 KDM4DQ6B0I6 523 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 ZNF322Q6U7Q0 402 aaPredicted RBP15.68■□□□□ 0.1
CLN6-221ENST00000637494 SHISA2Q6UWI4 295 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 MOB3CQ70IA8 216 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 FAM216BQ8N7L0 139 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 OR5T2Q8NGG2 359 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 OR5A2Q8NGI9 324 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 OR51E1Q8TCB6 317 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 H1FXQ92522 213 aaKnown RBP15.68■□□□□ 0.1
CLN6-221ENST00000637494 RAB3IPQ96QF0 476 aaPredicted RBP15.68■□□□□ 0.1
CLN6-221ENST00000637494 IL4I1Q96RQ9 567 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 ZNF747Q9BV97 191 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 GABARAPL1Q9H0R8 117 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 SIRPDQ9H106 197 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 GPR84Q9NQS5 396 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 SNTG1Q9NSN8 517 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 ACOXLQ9NUZ1 547 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 PIGLQ9Y2B2 252 aa15.68■□□□□ 0.1
CLN6-221ENST00000637494 SOX21Q9Y651 276 aaPredicted RBP15.68■□□□□ 0.1
CLN6-221ENST00000637494 IGHV1-69DA0A0B4J2H0 117 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 OR5B21A6NL26 309 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.67■□□□□ 0.1
CLN6-221ENST00000637494 IGHV1-69P01742 117 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 CEP78Q5JTW2 689 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 BCL2L15Q5TBC7 163 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 ATPAF1Q5TC12 328 aaPredicted RBP15.67■□□□□ 0.1
CLN6-221ENST00000637494 PLCXD3Q63HM9 321 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 C12orf73Q69YU5 71 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 STUMQ69YW2 141 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 AMIGO2Q86SJ2 522 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 TBC1D15Q8TC07 691 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 HPSE2Q8WWQ2 592 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 TMIGD2Q96BF3 282 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 PRDM13Q9H4Q3 707 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 CLN6Q9NWW5 311 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 NLKQ9UBE8 527 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 COPS3Q9UNS2 423 aa15.67■□□□□ 0.1
CLN6-221ENST00000637494 CAB39Q9Y376 341 aaPredicted RBP15.67■□□□□ 0.1
CLN6-221ENST00000637494 POM121CA8CG34 1229 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 DHRS3O75911 302 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 TGM4P49221 684 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 EGR3Q06889 387 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 ZNF684Q5T5D7 378 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 AADACL4Q5VUY2 407 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 Q6YL49 198 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 VMO1Q7Z5L0 202 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 BCDIN3DQ7Z5W3 292 aaKnown RBP15.66■□□□□ 0.1
CLN6-221ENST00000637494 TMEM86BQ8N661 226 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 KIR3DL3Q8N743 410 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 LRTOMTQ8WZ04 291 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 SEH1LQ96EE3 360 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 DUS3LQ96G46 650 aaKnown RBP15.66■□□□□ 0.1
CLN6-221ENST00000637494 WDR13Q9H1Z4 485 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 TNFRSF19Q9NS68 423 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 SLC25A10Q9UBX3 287 aaPredicted RBP15.66■□□□□ 0.1
CLN6-221ENST00000637494 WARS2Q9UGM6 360 aaKnown RBP15.66■□□□□ 0.1
CLN6-221ENST00000637494 POMT1Q9Y6A1 747 aa15.66■□□□□ 0.1
CLN6-221ENST00000637494 OR2AT4A6NND4 320 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 M0R129 80 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 NRASP01111 189 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 KRT8P05787 483 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 FAHP16930 419 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 NDUFB7P17568 137 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 EEF1B2P24534 225 aaKnown RBP15.65■□□□□ 0.1
CLN6-221ENST00000637494 ATP6V1E1P36543 226 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 GABRA2P47869 451 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 KRT74Q7RTS7 529 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 LY6G5BQ8NDX9 201 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 OR51G2Q8NGK0 314 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 SSMEM1Q8WWF3 244 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 CENPNQ96H22 339 aaPredicted RBP15.65■□□□□ 0.1
CLN6-221ENST00000637494 APOL4Q9BPW4 351 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 DCTN5Q9BTE1 182 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 OR51I2Q9H344 312 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 UNKLQ9H9P5 680 aaKnown RBP15.65■□□□□ 0.1
CLN6-221ENST00000637494 ADGRL4Q9HBW9 690 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.65■□□□□ 0.1
CLN6-221ENST00000637494 FAM96BQ9Y3D0 163 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 SNX5Q9Y5X3 404 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 R4GMQ9 66 aa15.65■□□□□ 0.1
CLN6-221ENST00000637494 A0A1B0GW55 424 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 A0A1W2PQ09 198 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 SPRY1O43609 319 aaPredicted RBP15.64■□□□□ 0.09
CLN6-221ENST00000637494 TTRP02766 147 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 DUX4L2P0CJ85 424 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 DUX4L3P0CJ86 424 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 DUX4L4P0CJ87 422 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 DUX4L5P0CJ88 424 aa15.64■□□□□ 0.09
CLN6-221ENST00000637494 DUX4L6P0CJ89 424 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms