RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OR8B12Q8NGG6 310 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 SSC4DQ8WTU2 575 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 DDIT4LQ96D03 193 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 RSRP1Q9BUV0 290 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 PAPOLGQ9BWT3 736 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A0C4DFX4 3053 aa13.05□□□□□ -0.32
CACNA1A-220ENST00000635988 ANKUB1A6NFN9 424 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 PPIHO43447 177 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 GPR137BO60478 399 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 SEMA4FO95754 770 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 HTR5AP47898 357 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 OR2B8PP59922 312 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 TGIF1Q15583 401 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 GALNTL5Q7Z4T8 443 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 CD300LFQ8TDQ1 290 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 RELTQ969Z4 430 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 MVB12AQ96EY5 273 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 GAS2L1Q99501 681 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 S100A13Q99584 98 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 C20orf24Q9BUV8 137 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 PECRQ9BY49 303 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 CHRNA10Q9GZZ6 450 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 KCNIP3Q9Y2W7 256 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 PRH1P02810 166 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 DAOP14920 347 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 CHATP28329 748 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 ACY1Q03154 408 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 TFF2Q03403 129 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 FZD2Q14332 565 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 TMEM31Q5JXX7 168 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 WDFY1Q8IWB7 410 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 LILRB2Q8N423 598 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 OR1N1Q8NGS0 311 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 FAM71F1Q96KD3 344 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 MESP1Q9BRJ9 268 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 PARP12Q9H0J9 701 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 DECR2Q9NUI1 292 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 LHFPL6Q9Y693 200 aa13.04□□□□□ -0.32
CACNA1A-220ENST00000635988 ARG1P05089 322 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 HPNP05981 417 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 SUMO3P55854 103 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF121P58317 390 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 CLINT1Q14677 625 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 TTLL10Q6ZVT0 673 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF441Q8N8Z8 693 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ERGIC1Q969X5 290 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 MRPL38Q96DV4 380 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 GGACTQ9BVM4 153 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 OPA3Q9H6K4 179 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 UNKLQ9H9P5 680 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 UCK1Q9HA47 277 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ALKBH4Q9NXW9 302 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 TLCD2A6NGC4 264 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 THEGLP0DJG4 465 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF17P17021 662 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 HOXA5P20719 270 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 OR1D4P47884 311 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 GABREP78334 506 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 SHDQ96IW2 340 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF2Q9BSG1 426 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 TM2D1Q9BX74 207 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 SERINC1Q9NRX5 453 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 TREM2Q9NZC2 230 aa13.03□□□□□ -0.32
CACNA1A-220ENST00000635988 LAMA3Q16787 3333 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 A0A1W2PPE2 198 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 RHPN2P1A8MT19 583 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 OR2C1O95371 312 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 SCGB1D2O95969 90 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 LMO1P25800 156 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 FASLGP48023 281 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 C17orf67Q0P5P2 114 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 KISS1Q15726 138 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 NSDHLQ15738 373 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF239Q16600 458 aaKnown RBP13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 DBX2Q6ZNG2 339 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 BADQ92934 168 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 GNRHR2Q96P88 292 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 EMC6Q9BV81 110 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 ZNF701Q9NV72 531 aaPredicted RBP13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 PADI1Q9ULC6 663 aa13.02□□□□□ -0.32
CACNA1A-220ENST00000635988 LILRA5A6NI73 299 aa13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 VSTM2BA6NLU5 285 aa13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 CLRN1P58418 232 aa13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 MRPS21P82921 87 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 SOHLH1Q5JUK2 328 aa13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 LRRC18Q8N456 261 aa13.02□□□□□ -0.33
CACNA1A-220ENST00000635988 MAFIPQ8WZ33 124 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms