RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 PHF7Q9BWX1 381 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 TAPBPLQ9BX59 468 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 APOBEC3GQ9HC16 384 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 AMBNQ9NP70 447 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 GPR27Q9NS67 375 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 LIN7CQ9NUP9 197 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 FKBP11Q9NYL4 201 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NAT8Q9UHE5 227 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 RAI2Q9Y5P3 530 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NAV1Q8NEY1 1877 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 DDX60LQ5H9U9 1706 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SLX4Q8IY92 1834 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 IGLV3-22A0A075B6J6 115 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 TBC1D3IA0A087WXS9 549 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 A0A1W2PP55 124 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 GAGE12BA1L429 117 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 C2CD4BA6NLJ0 364 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NPIPB5A8MRT5 1133 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 STK16O75716 305 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 HPRT1P00492 218 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 DBIP07108 87 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 IL6RP08887 468 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 TBC1D3HP0C7X1 549 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OR5H8P0DN80 308 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 HIST1H1EP10412 219 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 CDKN1AP38936 164 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 LGALS7P47929 136 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 TAS2R31P59538 309 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 H3F3AP84243 136 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ADIRFQ15847 76 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 TMEM201Q5SNT2 666 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 LCTLQ6UWM7 567 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OAFQ86UD1 273 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 LRP11Q86VZ4 500 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF709Q8N972 641 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OR4L1Q8NH43 312 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OR51F2Q8NH61 342 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 FAM110DQ8TAY7 271 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNRF4Q8WWF5 429 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 PEBP4Q96S96 227 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 INSM2Q96T92 566 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NDUFB11Q9NX14 153 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 VPREB3Q9UKI3 123 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 WDR45Q9Y484 360 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 FRMPD3Q5JV73 1810 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 PPIAL4EA0A075B759 164 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 A0A1W2PPE3 182 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 A0A1W2PR48 441 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 IGSF23A1L1A6 192 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 CNMDO75829 334 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 UMODP07911 640 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SP9P0CG40 484 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 PPIAL4FP0DN26 164 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 EGR1P18146 543 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ADORA2BP29275 332 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OR1D4P47884 311 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 GABRA4P48169 554 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SNRPD1P62314 119 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 HIST1H3AP68431 136 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 MALLQ13021 153 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SPHARQ15513 63 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 HIST3H3Q16695 136 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NKPD1Q17RQ9 610 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 C6orf136Q5SQH8 315 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ACSM6Q6P461 480 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 RPL22L1Q6P5R6 122 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 INO80CQ6PI98 192 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF474Q6S9Z5 364 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF730Q6ZMV8 503 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 Q6ZSR9 355 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 PARS2Q7L3T8 475 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 STHQ8IWL8 128 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 RELL2Q8NC24 303 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 OR51A4Q8NGJ6 313 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 EMG1Q92979 244 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 IGSF8Q969P0 613 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 IMP4Q96G21 291 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SOSTQ9BQB4 213 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SNRNP25Q9BV90 132 aaKnown RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 SEC11CQ9BY50 192 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 VN1R1Q9GZP7 353 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 CHRNA10Q9GZZ6 450 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 MEPEQ9NQ76 525 aaPredicted RBP3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ZNF226Q9NYT6 803 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 GPR132Q9UNW8 380 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 ST3GAL6Q9Y274 331 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 PPIAL4AQ9Y536 164 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 LRP12Q9Y561 859 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 COX11Q9Y6N1 276 aa3.47□□□□□ -1.85
R3HDM1-220ENST00000628915 NUP98P52948 1817 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 A0A1W2PQM1 296 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 GAGE12JA6NER3 117 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 OR4C45A6NMZ5 311 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 HMSDA8MTL9 139 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 GAGE7O76087 117 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 APOA2P02652 100 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 LINC00032P0C843 101 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 GAGE12FP0CL80 117 aa3.46□□□□□ -1.85
R3HDM1-220ENST00000628915 GAGE12GP0CL81 117 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms