RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CLCF1Q9UBD9 225 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 ANAPC10Q9UM13 185 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 KCNK7Q9Y2U2 307 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 PIEZO2Q9H5I5 2752 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 DNAJC13O75165 2243 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 RTTNQ86VV8 2226 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 CRTAPO75718 401 aaPredicted RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 IL18BPO95998 194 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 GSTP1P09211 210 aaKnown RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 HIST1H1DP16402 221 aaKnown RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 ERP29P30040 261 aaKnown RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 SLC22A6Q4U2R8 563 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 SLC36A1Q7Z2H8 476 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 ZNF584Q8IVC4 421 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 NUDCD2Q8WVJ2 157 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 SEC22CQ9BRL7 303 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 URM1Q9BTM9 101 aaKnown RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 TM2D1Q9BX74 207 aa17.05■□□□□ 0.32
TREX1-205ENST00000625293 TINAGL1Q9GZM7 467 aaPredicted RBP17.05■□□□□ 0.32
TREX1-205ENST00000625293 MEIKINA0A087WXM9 373 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 ZNF736B4DX44 427 aaPredicted RBP17.04■□□□□ 0.32
TREX1-205ENST00000625293 SS18L1O75177 396 aaPredicted RBP17.04■□□□□ 0.32
TREX1-205ENST00000625293 WISP2O76076 250 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 VSIG10L2P0DP72 767 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 OR3A2P47893 321 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 PRSS12P56730 875 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 CNN3Q15417 329 aaKnown RBP17.04■□□□□ 0.32
TREX1-205ENST00000625293 CLVS2Q5SYC1 327 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 PCSK4Q6UW60 755 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 OR56B1Q8NGI3 324 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 CAPSLQ8WWF8 208 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 EXTL1Q92935 676 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 GMPPAQ96IJ6 420 aaPredicted RBP17.04■□□□□ 0.32
TREX1-205ENST00000625293 ING4Q9UNL4 249 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 NPTNQ9Y639 398 aa17.04■□□□□ 0.32
TREX1-205ENST00000625293 IGKV1-27A0A075B6S5 117 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 SNRPGP15A8MWD9 76 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 SMLR1H3BR10 107 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 M0QYG6 137 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 MFNGO00587 321 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 AQP7O14520 342 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 PRKACBP22694 351 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 MPZP25189 248 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 MPGP29372 298 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 ARR3P36575 388 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 MRPS15P82914 257 aaKnown RBP17.03■□□□□ 0.32
TREX1-205ENST00000625293 FBXW9Q5XUX1 488 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 ZNF626Q68DY1 528 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 OR1K1Q8NGR3 316 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 RAB3CQ96E17 227 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 BBC3Q96PG8 261 aaPredicted RBP17.03■□□□□ 0.32
TREX1-205ENST00000625293 C12orf49Q9H741 205 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.03■□□□□ 0.32
TREX1-205ENST00000625293 CACNA1GO43497 2377 aa17.03■□□□□ 0.32
TREX1-205ENST00000625293 FREM1Q5H8C1 2179 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 SSNA1O43805 119 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 ANXA3P12429 323 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 MGMTP16455 207 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 PNLIPRP3Q17RR3 467 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 ZBTB37Q5TC79 503 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 GVQW1Q8N7I0 195 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 OR4S1Q8NGB4 309 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 DACT3Q96B18 629 aaPredicted RBP17.02■□□□□ 0.32
TREX1-205ENST00000625293 SLC2A8Q9NY64 477 aa17.02■□□□□ 0.32
TREX1-205ENST00000625293 OR14I1A6ND48 311 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 RAD51DO75771 328 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 NAT1P18440 290 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 MTCP1P56278 107 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 MEF2DQ14814 521 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 CDK10Q15131 360 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 ASCL4Q6XD76 172 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 STEAP2Q8NFT2 490 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 ZFAND1Q8TCF1 268 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 BCL2L2Q92843 193 aaPredicted RBP17.02■□□□□ 0.31
TREX1-205ENST00000625293 POM121L2Q96KW2 1035 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 PLSCR2Q9NRY7 297 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 GLRX2Q9NS18 164 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 ZNF222Q9UK12 451 aa17.02■□□□□ 0.31
TREX1-205ENST00000625293 RGS13O14921 159 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 FABP7O15540 132 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 NRASP01111 189 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 AMY2AP04746 511 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 RAB1AP62820 205 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 GUSBP1Q15486 140 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 TMEM53Q6P2H8 277 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 LHFPL2Q6ZUX7 228 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 DPPA2Q7Z7J5 298 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 OR10K1Q8NGX5 313 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 CPNE2Q96FN4 548 aaPredicted RBP17.01■□□□□ 0.31
TREX1-205ENST00000625293 ARHGAP5-AS1Q96IT6 56 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 CYYR1Q96J86 154 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 SLC6A7Q99884 636 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 SLC25A21Q9BQT8 299 aaPredicted RBP17.01■□□□□ 0.31
TREX1-205ENST00000625293 REPIN1Q9BWE0 567 aaKnown RBP17.01■□□□□ 0.31
TREX1-205ENST00000625293 ALX4Q9H161 411 aaPredicted RBP17.01■□□□□ 0.31
TREX1-205ENST00000625293 PLSCR3Q9NRY6 295 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 BOLA1Q9Y3E2 137 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 ATRXP46100 2492 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 KALRNO60229 2985 aa17.01■□□□□ 0.31
TREX1-205ENST00000625293 ZNF816-ZNF321PA0A0X1KG74 233 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms