RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SUSD2Q9UGT4 822 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 NPIPA1Q9UND3 350 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 PUS1Q9Y606 427 aaKnown RBP eCLIP12.44□□□□□ -0.42
LDB3-209ENST00000623056 BORCS7-ASMTA0A0B4J1R7 106 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 A0A1B0GV50 99 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
LDB3-209ENST00000623056 ALG1L2C9J202 215 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 FTCDNL1E5RQL4 147 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 PRH1P02810 166 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 COL9A1P20849 921 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 CHATP28329 748 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 SUCLG1P53597 346 aaKnown RBP12.44□□□□□ -0.42
LDB3-209ENST00000623056 COMMD2Q86X83 199 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 MUCL1Q96DR8 90 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 URM1Q9BTM9 101 aaKnown RBP12.44□□□□□ -0.42
LDB3-209ENST00000623056 TBL1XR1Q9BZK7 514 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 GAR1Q9NY12 217 aaKnown RBP12.44□□□□□ -0.42
LDB3-209ENST00000623056 OBP2AQ9NY56 170 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 MMP24Q9Y5R2 645 aa12.44□□□□□ -0.42
LDB3-209ENST00000623056 LINC01565O15544 149 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 IFNA21P01568 189 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 P2RY1P47900 373 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 CHRFAM7AQ494W8 412 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 TMEM151BQ8IW70 566 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 OR10H5Q8NGA6 315 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 GPR119Q8TDV5 335 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 RHOVQ96L33 236 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 S100A13Q99584 98 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 OR10A2Q9H208 303 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 PARPBPQ9NWS1 579 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 MED29Q9NX70 200 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 DOK5Q9P104 306 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 METTL12A8MUP2 240 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 E5RGE8 158 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 HCKP08631 526 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 HNRNPA2B1P22626 353 aaKnown RBP12.43□□□□□ -0.42
LDB3-209ENST00000623056 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
LDB3-209ENST00000623056 GABRA4P48169 554 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 GRINAQ7Z429 371 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 SGPP2Q8IWX5 399 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 YAF2Q8IY57 180 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 OR51T1Q8NGJ9 327 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 DAZLQ92904 295 aaKnown RBP12.43□□□□□ -0.42
LDB3-209ENST00000623056 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 GPER1Q99527 375 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 PRDM13Q9H4Q3 707 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 ATXN7L1Q9ULK2 861 aaPredicted RBP12.43□□□□□ -0.42
LDB3-209ENST00000623056 NSG2Q9Y328 171 aa12.43□□□□□ -0.42
LDB3-209ENST00000623056 STRAPQ9Y3F4 350 aaKnown RBP12.43□□□□□ -0.42
LDB3-209ENST00000623056 MYO9BQ13459 2157 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 A0A1W2PQD3 144 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 H0YIG0 161 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 RAMP1O60894 148 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 MBPP02686 304 aaPredicted RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 HPNP05981 417 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 DAP3P51398 398 aaKnown RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 C14orf28Q4W4Y0 310 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 ABHD12BQ7Z5M8 362 aaPredicted RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 SULF2Q8IWU5 870 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 SUMF2Q8NBJ7 301 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 SEMA6DQ8NFY4 1073 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 GPBAR1Q8TDU6 330 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 HPSE2Q8WWQ2 592 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 H7C1Q1 480 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 TSPAN2O60636 221 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 IGKV3-11P04433 115 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 RNF224P0DH78 156 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 SLC2A1P11166 492 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 HSD11B2P80365 405 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 HHEXQ03014 270 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 FAM189A2Q15884 450 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 TSLPQ969D9 159 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 RARRES2Q99969 163 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 ZNF2Q9BSG1 426 aaPredicted RBP12.42□□□□□ -0.42
LDB3-209ENST00000623056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
LDB3-209ENST00000623056 GFOD1Q9NXC2 390 aa12.42□□□□□ -0.42
LDB3-209ENST00000623056 IGKV1D-8A0A087WSZ0 117 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 A0A1B0GV90 55 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 A0A1W2PQF6 199 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 SELLP14151 372 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 ANOS1P23352 680 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 NTSR1P30989 418 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 TFF2Q03403 129 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 Q3ZCU0 254 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 TMEM31Q5JXX7 168 aa12.41□□□□□ -0.42
LDB3-209ENST00000623056 Q6ZSR6 202 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms