RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NTF4P34130 210 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 DLSTP36957 453 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 SUPT4H1P63272 117 aaKnown RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 SURF2Q15527 256 aaPredicted RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 GLRX5Q86SX6 157 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 OR13G1Q8NGZ3 307 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 CPT1CQ8TCG5 803 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 SPSB1Q96BD6 273 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 SCGB3A2Q96PL1 93 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 C1QTNF6Q9BXI9 259 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 RAB18Q9NP72 206 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 TMEM38BQ9NVV0 291 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 PLEK2Q9NYT0 353 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 TCFL5Q9UL49 500 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 HOXD4P09016 255 aaPredicted RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 FCGR2AP12318 317 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 LYL1P12980 280 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 RPS2P15880 293 aaKnown RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 PSMB6P28072 239 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 NUP62P37198 522 aaPredicted RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 CYCSP99999 105 aaKnown RBP8.24□□□□□ -1.09
PDPN-212ENST00000621990 DBX2Q6ZNG2 339 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 Q7L0L9 218 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 OR5D18Q8NGL1 313 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 CASTOR1Q8WTX7 329 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 SHARPINQ9H0F6 387 aa8.24□□□□□ -1.09
PDPN-212ENST00000621990 CCDC187A0A096LP49 1063 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 MASP2O00187 686 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 RRP8O43159 456 aaKnown RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 SGCEO43556 437 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 P04436 131 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 AMY2BP19961 511 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 BLVRBP30043 206 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 SERPINF1P36955 418 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 NPY4RP50391 375 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SNU13P55769 128 aaKnown RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 ARFRP1Q13795 201 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 TUSC1Q2TAM9 212 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 LRRC37A5PQ49AS3 106 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DCAF12Q5T6F0 453 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 RIPPLY2Q5TAB7 128 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 CLEC18BQ6UXF7 455 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 TMEM17Q86X19 198 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 PXT1Q8NFP0 134 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SEMA6DQ8NFY4 1073 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 OR5AP2Q8NGF4 316 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 STOML3Q8TAV4 291 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 THAP6Q8TBB0 222 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 Q96M66 194 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 CDC6Q99741 560 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 PPA2Q9H2U2 334 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 PRDM6Q9NQX0 595 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 MBD2Q9UBB5 411 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 COLQQ9Y215 455 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 MYO7BQ6PIF6 2116 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 F8VVB4 439 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 F8VWA3 439 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ACKR3P25106 362 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 LUMP51884 338 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 CARD18P57730 90 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 HGFACQ04756 655 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 TMEM42Q69YG0 159 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ASCL4Q6XD76 172 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 KCTD9Q7L273 389 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 C1orf210Q8IVY1 113 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 OR1F12Q8NHA8 337 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 RNF126Q9BV68 326 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 CRLF2Q9HC73 371 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 CHMP1AQ9HD42 196 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 DECR2Q9NUI1 292 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ZNF391Q9UJN7 358 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 PADI1Q9ULC6 663 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SDK2Q58EX2 2172 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 TEX13DA0A0J9YY54 714 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 LOC105371267A0A1B0GV96 52 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 A0A1B0GW55 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 RFPL3SP0C7P2 107 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L2P0CJ85 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L3P0CJ86 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L4P0CJ87 422 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L5P0CJ88 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L6P0CJ89 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 DUX4L7P0CJ90 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SERPINA2P20848 420 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 CLDN15P56746 228 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ZXDAP98168 799 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SCRN3Q0VDG4 424 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 SSPNQ14714 243 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 GALNTL5Q7Z4T8 443 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 YRDCQ86U90 279 aaKnown RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 ZNF100Q8IYN0 542 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 INO80EQ8NBZ0 244 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 GALNT11Q8NCW6 608 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 OR14L1PQ8NHC6 308 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 NPRL2Q8WTW4 380 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
PDPN-212ENST00000621990 ARPC5LQ9BPX5 153 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ZPBPQ9BS86 351 aa8.23□□□□□ -1.09
PDPN-212ENST00000621990 ST6GALNAC5Q9BVH7 336 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms