RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SLC30A7Q8NEW0 376 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 OR1J1Q8NGS3 322 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 GRPEL2Q8TAA5 225 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 TMEM54Q969K7 222 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 TOMM40LQ969M1 308 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 TMEM59Q9BXS4 323 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 TRAV1-2A0A0B4J238 106 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 GEMIN2O14893 280 aaKnown RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 TPD52L2O43399 206 aaKnown RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 SULT1B1O43704 296 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 SLC19A2O60779 497 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 WDR1O75083 606 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 IL2RAP01589 272 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 HPXP02790 462 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 GSK3AP49840 483 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 C4orf46Q504U0 113 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 PYHIN1Q6K0P9 492 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 UNQ9370/PRO34162Q6UXP9 181 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 TRAPPC6BQ86SZ2 158 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 AKAP14Q86UN6 197 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 GTF3AQ92664 365 aaKnown RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 ABCA2Q9BZC7 2435 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 IGKV1-27A0A075B6S5 117 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 LOC100289279A0A1B0GTE1 492 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 CENPXA8MT69 81 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 TEX46H3BTG2 121 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 SLC17A2O00624 439 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 SYNGR1O43759 233 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 RHBDL1O75783 438 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 GLSO94925 669 aaPredicted RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 ACHEP22303 614 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 RAD52P43351 418 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 KIR2DL2P43627 348 aaPredicted RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 NPY4RP50391 375 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 MRPL49Q13405 166 aaKnown RBP9.12□□□□□ -0.95
VPS11-208ENST00000621676 UBE2NLQ5JXB2 153 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 MZT2BQ6NZ67 158 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 RHOUQ7L0Q8 258 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 KCTD9Q7L273 389 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 FAM214BQ7L5A3 538 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 ZNF584Q8IVC4 421 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 IL1F10Q8WWZ1 152 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 SARAFQ96BY9 339 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 SEC22AQ96IW7 307 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 PLEKHJ1Q9NW61 149 aa9.12□□□□□ -0.95
VPS11-208ENST00000621676 HTR3EA5X5Y0 456 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ZNF732B4DXR9 585 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ETV2O00321 342 aaPredicted RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 SYNGR3O43761 229 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 MGMTP16455 207 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 CXCL3P19876 107 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 SSTR2P30874 369 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 HIST3H3Q16695 136 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 HDDC2Q7Z4H3 204 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 OR14K1Q8NGZ2 314 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 SNX18Q96RF0 628 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 CDH20Q9HBT6 801 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 IFT46Q9NQC8 304 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 GNG2P59768 71 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 TNK1Q13470 666 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 LRP11Q86VZ4 500 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 WDR13Q9H1Z4 485 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ZNF442Q9H7R0 627 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 B3GNT2Q9NY97 397 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ABRACLQ9P1F3 81 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 PTPRBP23467 1997 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 TRBV5-7A0A0A0MS05 114 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 CDIPTO14735 213 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 CDC14BO60729 498 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 DHRS3O75911 302 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 NXPH3O95157 252 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 UBL3O95164 117 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 HRGP04196 525 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 TCRBP04435 133 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 GRNP28799 593 aaKnown RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 GRB2P62993 217 aaKnown RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 FCN2Q15485 313 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ABLIM2Q6H8Q1 611 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 FAM53AQ6NSI3 398 aaPredicted RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 BTN2A1Q7KYR7 527 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 PNLDC1Q8NA58 520 aaKnown RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 OR4C16Q8NGL9 310 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 SORCS2Q96PQ0 1159 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 MNTQ99583 582 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 SF3B5Q9BWJ5 86 aaKnown RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 CHMP1AQ9HD42 196 aaPredicted RBP9.11□□□□□ -0.95
VPS11-208ENST00000621676 HRASLSQ9HDD0 168 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 ACKR4Q9NPB9 350 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 TBCCD1Q9NVR7 557 aa9.11□□□□□ -0.95
VPS11-208ENST00000621676 HECTD1Q9ULT8 2610 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 OR6C65A6NJZ3 312 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 HRH1P35367 487 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 WNT5AP41221 380 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 PTGFRP43088 359 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 FAM3AP98173 230 aa9.1□□□□□ -0.95
VPS11-208ENST00000621676 RIPPLY1Q0D2K3 151 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms