RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 OR10A2Q9H208 303 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 TOR3AQ9H497 397 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 CNTD2Q9H8S5 307 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 RNPEPL1Q9HAU8 725 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 BEX1Q9HBH7 125 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 TRIM36Q9NQ86 728 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF391Q9UJN7 358 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
CPNE3-210ENST00000621245 LRP12Q9Y561 859 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 CLPSL1A2RUU4 121 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CCDC182A6NF36 153 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CST1P01037 141 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 LYNP07948 512 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 MRPL3P09001 348 aaKnown RBP9.37□□□□□ -0.91
CPNE3-210ENST00000621245 RAP2AP10114 183 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 MUC1P15941 1255 aaPredicted RBP9.37□□□□□ -0.91
CPNE3-210ENST00000621245 SLC15A1P46059 708 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 PROK1P58294 105 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 BPIFB3P59826 476 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 MICBQ29980 383 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CEP78Q5JTW2 689 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 ASPHD2Q6ICH7 369 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 HCP5Q6MZN7 132 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 Q6ZSV7 163 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CPOQ8IVL8 374 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 GALNT4Q8N4A0 578 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 OR52H1Q8NGJ2 320 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 ANGPTL6Q8NI99 470 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 THEM6Q8WUY1 208 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CANT1Q8WVQ1 401 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 H1FXQ92522 213 aaKnown RBP9.37□□□□□ -0.91
CPNE3-210ENST00000621245 PIGCQ92535 297 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 TNFRSF14Q92956 283 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 PPP1R14AQ96A00 147 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 FAM71F1Q96KD3 344 aaPredicted RBP9.37□□□□□ -0.91
CPNE3-210ENST00000621245 RAB3IPQ96QF0 476 aaPredicted RBP9.37□□□□□ -0.91
CPNE3-210ENST00000621245 CCT8L2Q96SF2 557 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 DCTN5Q9BTE1 182 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 MUC13Q9H3R2 512 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 HAO2Q9NYQ3 351 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 ZNRD1Q9P1U0 126 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 COPS3Q9UNS2 423 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 KPTNQ9Y664 436 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 POMT1Q9Y6A1 747 aa9.37□□□□□ -0.91
CPNE3-210ENST00000621245 IGKV1D-17A0A075B6S4 117 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 MEGF11A6BM72 1044 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 ECDO95905 644 aaPredicted RBP9.36□□□□□ -0.91
CPNE3-210ENST00000621245 CRYBA1P05813 215 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 GNALP38405 381 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 GPM6AP51674 278 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 BLVRAP53004 296 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 CDK5Q00535 292 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 MFGE8Q08431 387 aaPredicted RBP9.36□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF788Q6ZQV5 615 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 C17orf107Q6ZR85 190 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 KCTD8Q6ZWB6 473 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 BCDIN3DQ7Z5W3 292 aaKnown RBP9.36□□□□□ -0.91
CPNE3-210ENST00000621245 BATF2Q8N1L9 274 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 DYRK2Q92630 601 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 ASB9Q96DX5 294 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 AJUBAQ96IF1 538 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF488Q96MN9 340 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 MICU1Q9BPX6 476 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 RTL8AQ9BWD3 113 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 SP140LQ9H930 580 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 FAM206AQ9NX38 181 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 KIF17Q9P2E2 1029 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF222Q9UK12 451 aa9.36□□□□□ -0.91
CPNE3-210ENST00000621245 A0A1B0GVI7 797 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ARRDC5A6NEK1 342 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 PRR23D1E9PI22 279 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 NPFFO15130 113 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 MAGEB4O15481 346 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 NDUFB3O43676 98 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 TIPRLO75663 272 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 CST4P01036 141 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 PRR23D2P0DMB1 279 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ALOX5APP20292 161 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 CALB2P22676 271 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 SAA4P35542 130 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 CEBPDP49716 269 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ERVFRD-1P60508 538 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 MZT1Q08AG7 82 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 APOFQ13790 326 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ATPAF1Q5TC12 328 aaPredicted RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 SHFQ7M4L6 423 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 SLC36A1Q7Z2H8 476 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 TRPM8Q7Z2W7 1104 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ZDHHC23Q8IYP9 409 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 ARHGAP24Q8N264 748 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 CSNK2A3Q8NEV1 391 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 C8orf46Q8TAG6 207 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 TBC1D15Q8TC07 691 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 RORBQ92753 470 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 C12orf43Q96C57 262 aaKnown RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 RNF170Q96K19 258 aa9.35□□□□□ -0.91
CPNE3-210ENST00000621245 RBM4BQ9BQ04 359 aaKnown RBP9.35□□□□□ -0.91
CPNE3-210ENST00000621245 THTPAQ9BU02 230 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms