RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CSF2RAP15509 400 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TBPP20226 339 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CAMPP49913 170 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 RTP5Q14D33 572 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SAPCD1Q5SSQ6 148 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 SLC5A6Q9Y289 635 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PRTGQ2VWP7 1150 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 LY6G5CQ5SRR4 150 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR1K1Q8NGR3 316 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 MRPL24Q96A35 216 aaKnown RBP4.52□□□□□ -1.69
VPS13D-214ENST00000620676 OR10A5Q9H207 317 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 GAL3ST2Q9H3Q3 398 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CACFD1Q9UGQ2 172 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 M0R296 226 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 HOXA2O43364 376 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CLEC3BP05452 202 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CA3P07451 260 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 LYZL2Q7Z4W2 148 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 EID2Q8N6I1 236 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNRF4Q8WWF5 429 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 PELI1Q96FA3 418 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF558Q96NG5 402 aa4.52□□□□□ -1.69
VPS13D-214ENST00000620676 CHD5Q8TDI0 1954 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ACRP10323 421 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 TM4SF20Q53R12 229 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 WDR13Q9H1Z4 485 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 RBPJLQ9UBG7 517 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 A0A1W2PQ45 241 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 A0A1W2PQY0 241 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CLDN34H7C241 214 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CHEK1O14757 476 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 RUNX1Q01196 453 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 MED25Q71SY5 747 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 OR8A1Q8NGG7 326 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 RAB11FIP5Q9BXF6 653 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 OR3A4PP47883 348 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 KCNJ15Q99712 375 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 C5orf52A6NGY3 159 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CTSAP10619 480 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ANKRD55Q3KP44 614 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 NPSR1Q6W5P4 371 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 FBLIM1Q8WUP2 373 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF430Q9H8G1 570 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 PIAS3Q9Y6X2 628 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 KIDINS220Q9ULH0 1771 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 EDDM13A0A1B0GTR0 161 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 FGF9P31371 208 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 TRAT1Q6PIZ9 186 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 OR2L13Q8N349 312 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 WFDC12Q8WWY7 111 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 EID2BQ96D98 161 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 H7C2G1 150 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 COL10A1Q03692 680 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 C1orf61Q13536 156 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 MEGF9Q9H1U4 602 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 A0A087WV48 116 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 COLCA2A8K830 154 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 GDF9O60383 454 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CER1O95813 267 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 BHLHE23Q8NDY6 225 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 IMMP2LQ96T52 175 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 MYOGP15173 224 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CLEC18BQ6UXF7 455 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ALG14Q96F25 216 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 GSX1Q9H4S2 264 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 LOC389332A0A1B0GUA5 103 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CD79AP11912 226 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CD99P14209 185 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 HBG1P69891 147 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 HBG2P69892 147 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ACSM6Q6P461 480 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 C6orf201Q7Z4U5 140 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ADAT3Q96EY9 351 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 HEXA-AS1Q9H8Q6 139 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 PLEKHA2Q9HB19 425 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 FBXO34Q9NWN3 711 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 KCPQ6ZWJ8 1503 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 GALNSP34059 522 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 THBS2P35442 1172 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 NHLH1Q02575 133 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 POU3F1Q03052 451 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 PRSS53Q2L4Q9 553 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 PWWP2BQ6NUJ5 590 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 OR5AU1Q8NGC0 362 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 WBP2Q969T9 261 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 SLC25A38Q96DW6 304 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 SEH1LQ96EE3 360 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 DCBLD2Q96PD2 775 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CHST1O43916 411 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ACTL6AO96019 429 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CYBAP13498 195 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 HIST1H1TP22492 207 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 G6PCP35575 357 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM176BQ3YBM2 270 aaPredicted RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 SOX7Q9BT81 388 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 MRPL37Q9BZE1 423 aaKnown RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 PELI2Q9HAT8 420 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM140Q9NV12 185 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 YIPF1Q9Y548 306 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms