RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GSG1Q2KHT4 349 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RSPO1Q2MKA7 263 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SLC36A2Q495M3 483 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZMAT1Q5H9K5 638 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 PABPC1L2AQ5JQF8 200 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 TMEM255AQ5JRV8 349 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZBTB37Q5TC79 503 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 HIST2H3PS2Q5TEC6 136 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 FAM27BQ5VT28 67 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CORO6Q6QEF8 472 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ARL9Q6T311 187 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 HIST2H3AQ71DI3 136 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SPATC1Q76KD6 591 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 JAZF1Q86VZ6 243 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GLB1L2Q8IW92 636 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 LRRC18Q8N456 261 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SPICQ8N5J4 248 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SAMD12Q8N8I0 201 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF511Q8NB15 262 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 OR10H4Q8NGA5 316 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 OR10S1Q8NGN2 331 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RPS4Y2Q8TD47 263 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF431Q8TF32 576 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SNX33Q8WV41 574 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 FCAMRQ8WWV6 532 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ASB17Q8WXJ9 295 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GHSRQ92847 366 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DCLRE1CQ96SD1 692 aaKnown RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CNN2Q99439 309 aaKnown RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CACNG6Q9BXT2 260 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 TMPRSS13Q9BYE2 586 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 BCL2L14Q9BZR8 327 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 OR2H1Q9GZK4 316 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ALX4Q9H161 411 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 MMP28Q9H239 520 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GHITMQ9H3K2 345 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 MS4A5Q9H3V2 200 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RERGLQ9H628 205 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 WDR76Q9H967 626 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 UBTD1Q9HAC8 227 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ADGRL4Q9HBW9 690 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4Q9UBX2 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GLS2Q9UI32 602 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 FKBP7Q9Y680 259 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ANK2Q01484 3957 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 TRBV2A0A0J9YWF9 115 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MEGF11A6BM72 1044 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 LINC00862A6NCI5 91 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 OR6C6A6NF89 314 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PRR32B1ATL7 298 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 J3QLW9 94 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 AIPO00170 330 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SULT1C2O00338 296 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 RER1O15258 196 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SHOXO15266 292 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SYNGR3O43761 229 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 GLCEO94923 617 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 F12P00748 615 aaPredicted RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 RENP00797 406 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CD8AP01732 235 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SERPINA5P05154 406 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SOD3P08294 240 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MELTFP08582 738 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 H2AFB2P0C5Z0 115 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CLEC2LP0C7M8 214 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 COX5BP10606 129 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF35P13682 527 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF19P17023 458 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MSR1P21757 451 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CPT2P23786 658 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 AZGP1P25311 298 aaKnown RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CRABP1P29762 137 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 THBS2P35442 1172 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 GLRXP35754 106 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SERPINF1P36955 418 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 WNT5AP41221 380 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 RAD52P43351 418 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 EFNA4P52798 201 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 AP2S1P53680 142 aaPredicted RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 ATP5J2P56134 94 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SNRPD2P62316 118 aaKnown RBP4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CD83Q01151 205 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 NAAAQ02083 359 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PLP2Q04941 152 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CDK5R1Q15078 307 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 MPPED2Q15777 294 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CARTPTQ16568 116 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 PCK2Q16822 640 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SWI5Q1ZZU3 235 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 KRTAP27-1Q3LI81 207 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 Q5PR19 223 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 C11orf71Q6IPW1 123 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 SLC18B1Q6NT16 456 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF774Q6NX45 483 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CLEC2AQ6UVW9 174 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 CFAP77Q6ZQR2 320 aa4.51□□□□□ -1.69
SHMT1-211ENST00000618902 IDO2Q6ZQW0 420 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms