RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 S100A13Q99584 98 aa12.12□□□□□ -0.47
CBWD1-226ENST00000618061 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-226ENST00000618061 URM1Q9BTM9 101 aaKnown RBP12.12□□□□□ -0.47
CBWD1-226ENST00000618061 PRR13Q9NZ81 148 aa12.12□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF107Q9UII5 783 aaPredicted RBP12.12□□□□□ -0.47
CBWD1-226ENST00000618061 MRPS18CQ9Y3D5 142 aaKnown RBP12.12□□□□□ -0.47
CBWD1-226ENST00000618061 SCGNO76038 276 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 HPNP05981 417 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF806P0C7X5 589 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 NAT2P11245 290 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 GSK3AP49840 483 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 NPY4RP50391 375 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF92Q03936 586 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 SRSF6Q13247 344 aaKnown RBP12.11□□□□□ -0.47
CBWD1-226ENST00000618061 PABPC1L2AQ5JQF8 200 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 C6orf201Q7Z4U5 140 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 SLC2A8Q9NY64 477 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 TIMM10BQ9Y5J6 103 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 TRAV14DV4A0A0A6YYC5 116 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 FAM25EA8MYX2 175 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 LEUTXA8MZ59 168 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 HTR3BO95264 441 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 GSTP1P09211 210 aaKnown RBP12.11□□□□□ -0.47
CBWD1-226ENST00000618061 ZBTB25P24278 435 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 DHODHQ02127 395 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
CBWD1-226ENST00000618061 BRICD5Q6PL45 260 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 PECRQ9BY49 303 aa12.11□□□□□ -0.47
CBWD1-226ENST00000618061 URB1O60287 2271 aaKnown RBP12.1□□□□□ -0.47
CBWD1-226ENST00000618061 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF503-AS2A6NEH8 195 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 ARGFXA6NJG6 315 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 APOC1P02654 83 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 UBBP0CG47 229 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 MEOX1P50221 254 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 IL13RA1P78552 427 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
CBWD1-226ENST00000618061 RIPPLY1Q0D2K3 151 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 PDCD1Q15116 288 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 TRIP6Q15654 476 aaKnown RBP12.1□□□□□ -0.47
CBWD1-226ENST00000618061 TMPRSS7Q7RTY8 843 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 FAM89BQ8N5H3 189 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 DOCK7Q96N67 2140 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 NUDT16L1Q9BRJ7 211 aaKnown RBP12.1□□□□□ -0.47
CBWD1-226ENST00000618061 DEFB127Q9H1M4 99 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 B3GNT2Q9NY97 397 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 ABI3Q9P2A4 366 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 B4GALT7Q9UBV7 327 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 CSAG2Q9Y5P2 127 aa12.1□□□□□ -0.47
CBWD1-226ENST00000618061 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 C9orf170A2RU37 121 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 FOXI3A8MTJ6 420 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 HLA-HP01893 362 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 EDN3P14138 238 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF708P17019 499 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 AMY2BP19961 511 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 OR3A3P47888 321 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 AIMP2Q13155 320 aaKnown RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 PDSS1Q5T2R2 415 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 Q6ZSR3 168 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 LYG2Q86SG7 212 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 CDC6Q99741 560 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 PRRG4Q9BZD6 226 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 ARL6Q9H0F7 186 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 KCNN3Q9UGI6 736 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 MCTS1Q9ULC4 181 aaKnown RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 RPS10-NUDT3A0A1W2PQS6 291 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 EFSO43281 561 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 KCNAB3O43448 404 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 IFNA7P01567 189 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 SP1P08047 785 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 MMP7P09237 267 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 SPINK2P20155 84 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 SNU13P55769 128 aaKnown RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 FAM3AP98173 230 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 EIF3IQ13347 325 aaKnown RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 HLXQ14774 488 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 TAF9Q16594 264 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 RIPPLY2Q5TAB7 128 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 PIGCQ92535 297 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 DYRK2Q92630 601 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 PDCD10Q9BUL8 212 aa12.09□□□□□ -0.47
CBWD1-226ENST00000618061 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
CBWD1-226ENST00000618061 POM121CA8CG34 1229 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 MSTNO14793 375 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 PPIAP62937 165 aaKnown RBP12.08□□□□□ -0.48
CBWD1-226ENST00000618061 ATXN7L3Q14CW9 347 aaPredicted RBP12.08□□□□□ -0.48
CBWD1-226ENST00000618061 KRTAP27-1Q3LI81 207 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 VASH2Q86V25 355 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 CSNK2A3Q8NEV1 391 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.48
CBWD1-226ENST00000618061 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms