RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TMPRSS2O15393 492 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 RHBDL1O75783 438 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 LYPD3O95274 346 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 HPRP00739 348 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 MT-ND1P03886 318 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 MSMBP08118 114 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 METTL15P1P0C7V9 234 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 ZNF35P13682 527 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 ZNF14P17017 642 aaPredicted RBP7.31□□□□□ -1.24
GPC6-202ENST00000617456 AQP1P29972 269 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 GPR4P46093 362 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 GPR6P46095 362 aaPredicted RBP7.31□□□□□ -1.24
GPC6-202ENST00000617456 HTR5AP47898 357 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 CSNK1A1P48729 337 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 ZNF133P52736 654 aaPredicted RBP7.31□□□□□ -1.24
GPC6-202ENST00000617456 MTPNP58546 118 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 HILS1P60008 231 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 PKIAP61925 76 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SF3A3Q12874 501 aaKnown RBP eCLIP7.31□□□□□ -1.24
GPC6-202ENST00000617456 NPRL3Q12980 569 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 DAG1Q14118 895 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 CTF1Q16619 201 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 HAGHQ16775 308 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 C16orf89Q6UX73 402 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SLC35D2Q76EJ3 337 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 BPIFB6Q8NFQ5 453 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 GPR32P1Q8NGA4 272 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 OR6N1Q8NGY5 312 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 OR51F2Q8NH61 342 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 OR10A6Q8NH74 314 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SNX33Q8WV41 574 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 WFDC12Q8WWY7 111 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 TMEM203Q969S6 136 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 ZNF479Q96JC4 524 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 LINC00052Q96N35 136 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SIGLEC11Q96RL6 698 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 FOXB1Q99853 325 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 ULBP2Q9BZM5 246 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SMURF2Q9HAU4 748 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 TAS2R5Q9NYW4 299 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 SEC14L4Q9UDX3 406 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 CMAHPQ9Y471 501 aa7.31□□□□□ -1.24
GPC6-202ENST00000617456 LRRN3E7EW58 273 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 M0R3G1 203 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SYNGR3O43761 229 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 GADD45GO95257 159 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 FARS2O95363 451 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 RAB36O95755 333 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SPARCP09486 303 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 OR2T7P0C7T2 308 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 HLA-DOBP13765 273 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 COL8A2P25067 703 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 CD1BP29016 333 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 BDKRB2P30411 391 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 S100A11P31949 105 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 PMELP40967 661 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 PITPNBP48739 271 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 DAP3P51398 398 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 RAB1AP62820 205 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 BLOC1S1P78537 153 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SNTB2Q13425 540 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 AQP6Q13520 282 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 USF2Q15853 346 aaPredicted RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 ELFN2Q5R3F8 820 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 PRR31Q5SQ13 230 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SPATA46Q5T0L3 261 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 ACSM5Q6NUN0 579 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 UNQ6126/PRO20091Q6UXV3 157 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 C1orf229Q6ZS94 237 aaPredicted RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 MDP1Q86V88 176 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SLC22A24Q8N4F4 322 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 CELF2-AS1Q8N7Q2 184 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 DNAAF1Q8NEP3 725 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 TCTEX1D2Q8WW35 142 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 MRPL24Q96A35 216 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 ZNF837Q96EG3 531 aaPredicted RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 DMRTB1Q96MA1 342 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SLC6A7Q99884 636 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 PKP2Q99959 881 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 WFDC6Q9BQY6 131 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 SUCNR1Q9BXA5 334 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 EGLN1Q9GZT9 426 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 NAA50Q9GZZ1 169 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 POFUT1Q9H488 388 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 NOX3Q9HBY0 568 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 RANGRFQ9HD47 186 aaPredicted RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 RDH8Q9NYR8 311 aa7.3□□□□□ -1.24
GPC6-202ENST00000617456 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 ZNF346Q9UL40 294 aaKnown RBP7.3□□□□□ -1.24
GPC6-202ENST00000617456 METTL21EPA6NDL7 271 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PGPEP1LA6NFU8 196 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 FXYD1O00168 92 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 AIPO00170 330 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 DHHO43323 396 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 PPIHO43447 177 aaKnown RBP7.29□□□□□ -1.24
GPC6-202ENST00000617456 RNF13O43567 381 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 DOK2O60496 412 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 GLCEO94923 617 aa7.29□□□□□ -1.24
GPC6-202ENST00000617456 CH25HO95992 272 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms