RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TMEM269A0A1B0GVZ9 245 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PMS2P2O95744 297 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CEBPGP53567 150 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MRPS10P82664 201 aaKnown RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 ODF1Q14990 250 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF385BQ569K4 471 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZCCHC23Q6ZST2 131 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF767PQ75MW2 155 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF551Q7Z340 670 aaPredicted RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 VRK3Q8IV63 474 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PATE1Q8WXA2 126 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 DLGAP2Q9P1A6 1054 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 EML5Q05BV3 1969 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LOC100506127A0A0U1RQW1 187 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MPIG6BO95866 241 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 STSP08842 583 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CLDN8P56748 225 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NRARPQ7Z6K4 114 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PPA2Q9H2U2 334 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RHOFQ9HBH0 211 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 UFC1Q9Y3C8 167 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 AGTR1P30556 359 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LIMS2Q7Z4I7 341 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TOMM5Q8N4H5 51 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NEURL3Q96EH8 262 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TSPAN32Q96QS1 320 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NMES1Q9C002 83 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NDUFA13Q9P0J0 144 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF222Q9UK12 451 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SH2B3Q9UQQ2 575 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 F12P00748 615 aaPredicted RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 MBP02144 154 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 M6PRP20645 277 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 ZBTB25P24278 435 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 SDHAP31040 664 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 CTU2Q2VPK5 515 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 MOGAT2Q3SYC2 334 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 MRPL2Q5T653 305 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 UNQ5815/PRO19632Q6UWF5 114 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 TFAP2EQ6VUC0 442 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 SECTM1Q8WVN6 248 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 DOK1Q99704 481 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 SGPP1Q9BX95 441 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 DGCR6LQ9BY27 220 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 TNRC6BQ9UPQ9 1833 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 SNRPGP62308 76 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 RPL30P62888 115 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 CYCSP99999 105 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 ELFN2Q5R3F8 820 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 DRAM2Q6UX65 266 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 BEST4Q8NFU0 473 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 OR10G3Q8NGC4 313 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 OR10J6PQ8NGY7 276 aa2.96□□□□□ -1.93
LPP-220ENST00000617246 GMPR2Q9P2T1 348 aaKnown RBP2.96□□□□□ -1.93
LPP-220ENST00000617246 OR8U9P0C7N5 309 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 ZP4Q12836 540 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 ZNF678Q5SXM1 525 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 UBE2UQ5VVX9 321 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 AMER3Q8N944 861 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 NFAM1Q8NET5 270 aaPredicted RBP2.96□□□□□ -1.94
LPP-220ENST00000617246 CCDC106Q9BWC9 280 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 BATF3Q9NR55 127 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 H0YIV9 168 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 PRKYO43930 277 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 ADAM11O75078 769 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 C1QL1O75973 258 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 AKR7A3O95154 331 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 PPOXP50336 477 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 PABPC1L2AQ5JQF8 200 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 NANOGP1Q8N7R0 232 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 RNF2Q99496 336 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 ARL6Q9H0F7 186 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 C19orf12Q9NSK7 152 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 TINAGQ9UJW2 476 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 TMEM212A6NML5 194 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 GABRA4P48169 554 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 B4GALNT1Q00973 533 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 SYT9Q86SS6 491 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 CXorf67Q86X51 503 aaPredicted RBP2.96□□□□□ -1.94
LPP-220ENST00000617246 OR4S2Q8NH73 311 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 MED19A0JLT2 244 aaPredicted RBP2.96□□□□□ -1.94
LPP-220ENST00000617246 ST8SIA3O43173 380 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 RAMP3O60896 148 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 B3GALNT1O75752 331 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 FUT6P51993 359 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 ELF3P78545 371 aaPredicted RBP2.96□□□□□ -1.94
LPP-220ENST00000617246 DNM1P46Q6ZS02 220 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 LYSMD2Q8IV50 215 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 TMEM151AQ8N4L1 468 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 DERL3Q96Q80 235 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 A0A096LPE4 126 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 IGHV3-20A0A0C4DH32 117 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 A0A1W2PPZ6 126 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 HMGA1P17096 107 aaKnown RBP2.96□□□□□ -1.94
LPP-220ENST00000617246 TAS2R40P59535 323 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 FXYD4P59646 89 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 OR1Q1Q15612 314 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 TAF9Q16594 264 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 LRRC37A5PQ49AS3 106 aa2.96□□□□□ -1.94
LPP-220ENST00000617246 TM4SF20Q53R12 229 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms