RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SPINK4O60575 86 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 RECKO95980 971 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 BCL3P20749 454 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 GALR1P47211 349 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 ZXDAP98168 799 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 SPACA9Q96E40 222 aaPredicted RBP11.4□□□□□ -0.58
TCF4-248ENST00000616053 MS4A5Q9H3V2 200 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 GPR84Q9NQS5 396 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 CEACAM6P40199 344 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 ADAMTSL4Q6UY14 1074 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 RAXQ9Y2V3 346 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 GPANK1O95872 356 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 ALDOCP09972 364 aaKnown RBP11.4□□□□□ -0.58
TCF4-248ENST00000616053 YBX1P67809 324 aaKnown RBP11.4□□□□□ -0.58
TCF4-248ENST00000616053 SOX4Q06945 474 aaPredicted RBP11.4□□□□□ -0.58
TCF4-248ENST00000616053 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 AKR7LQ8NHP1 331 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 CLDN23Q96B33 292 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 CA10Q9NS85 328 aa11.4□□□□□ -0.58
TCF4-248ENST00000616053 MFSD2BA6NFX1 497 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 NGFP01138 241 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 GNG4P50150 75 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 TRAT1Q6PIZ9 186 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 CADM4Q8NFZ8 388 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 RFESDQ8TAC1 157 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 SMOC1Q9H4F8 434 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 GORASP2Q9H8Y8 452 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 AJAP1Q9UKB5 411 aaPredicted RBP11.4□□□□□ -0.59
TCF4-248ENST00000616053 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.59
TCF4-248ENST00000616053 ETV7Q9Y603 341 aa11.4□□□□□ -0.59
TCF4-248ENST00000616053 RGS13O14921 159 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ACHEP22303 614 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 LYPD4Q6UWN0 246 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SLC25A42Q86VD7 318 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ADPRHL1Q8NDY3 354 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 MBOAT2Q6ZWT7 520 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 MED30Q96HR3 178 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 PITPNC1Q9UKF7 332 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 POMT2Q9UKY4 750 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SNHG28P0DPA3 235 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 TMEM179BQ7Z7N9 219 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 FLYWCH2Q96CP2 140 aaKnown RBP11.39□□□□□ -0.59
TCF4-248ENST00000616053 NXT2Q9NPJ8 142 aaKnown RBP11.39□□□□□ -0.59
TCF4-248ENST00000616053 OR6C3Q9NZP0 311 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ERRFI1Q9UJM3 462 aaPredicted RBP11.39□□□□□ -0.59
TCF4-248ENST00000616053 SOX21Q9Y651 276 aaPredicted RBP11.39□□□□□ -0.59
TCF4-248ENST00000616053 STARD6P59095 220 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SLC17A1Q14916 467 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ZNF343Q6P1L6 599 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 PELI3Q8N2H9 469 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 KLK11Q9UBX7 282 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 OOEPA6NGQ2 149 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 CSN3P07498 182 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 CA5AP35218 305 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 GNG3P63215 75 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 LY6EQ16553 131 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 PROX2Q3B8N5 592 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 WDR88Q6ZMY6 472 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 TIFABQ6ZNK6 161 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 THAP10Q9P2Z0 257 aaPredicted RBP11.39□□□□□ -0.59
TCF4-248ENST00000616053 CACNG3O60359 315 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SELENOFO60613 162 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SCG5P05408 212 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SBK3P0C264 359 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
TCF4-248ENST00000616053 ACTL6AO96019 429 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 CA6P23280 308 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TOR2AQ5JU69 321 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FAM219AQ8IW50 185 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 VSTM2AQ8TAG5 236 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 GHSRQ92847 366 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 PEBP4Q96S96 227 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 MRPL13Q9BYD1 178 aaKnown RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 MDC1Q14676 2089 aaKnown RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 MAGI3Q5TCQ9 1506 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FCARP24071 287 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 RAB32Q13637 225 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 NCR3LG1Q68D85 454 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 MDP1Q86V88 176 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 OSR2Q8N2R0 312 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 GON7Q9BXV9 100 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 THBS4P35443 961 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 SSPNQ14714 243 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FAM106AQ4KMX7 169 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 FAM131CQ96AQ9 280 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 PERPQ96FX8 193 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 GSX1Q9H4S2 264 aaPredicted RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 METTL17Q9H7H0 456 aaPredicted RBP11.38□□□□□ -0.59
TCF4-248ENST00000616053 DCCP43146 1447 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 HYAL1Q12794 435 aa11.38□□□□□ -0.59
TCF4-248ENST00000616053 TCTN3Q6NUS6 607 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms