RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 MS4A18Q3C1V0 323 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 TMEM268Q5VZI3 342 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 TFAP2EQ6VUC0 442 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 SSX9Q7RTT3 188 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 WDR5BQ86VZ2 330 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 FBXL14Q8N1E6 418 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 DUSP18Q8NEJ0 188 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 SNIP1Q8TAD8 396 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 TMED6Q8WW62 240 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 PLPPR2Q96GM1 343 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 CMTM3Q96MX0 182 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 RCL1Q9Y2P8 373 aaKnown RBP7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 MED19A0JLT2 244 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 MSTNO14793 375 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 CLDN1O95832 211 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ONECUT2O95948 504 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 TNFSF4P23510 183 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 BAXQ07812 192 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 AANATQ16613 207 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF626Q68DY1 528 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 OR11G2Q8NGC1 345 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 SDHCQ99643 169 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 PROCRQ9UNN8 238 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 TRGV5A0A0B4J1U4 118 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ZFP62Q8NB50 900 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC39A7Q92504 469 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 H1FXQ92522 213 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 CNTNAP3Q9BZ76 1288 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 AKIRIN1Q9H9L7 192 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 DECR2Q9NUI1 292 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 MRPL22Q9NWU5 206 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 C9orf170A2RU37 121 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 OR13C7P0DN81 318 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 FABP6P51161 128 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 MLF1P58340 268 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 RPS4XP62701 263 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 RAC1P63000 192 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 PRDX4Q13162 271 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ADAM19Q9H013 955 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 DYNLRB1Q9NP97 96 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 PNPP00491 289 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 RRASP10301 218 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 FUT6P51993 359 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 PLGLAQ15195 96 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 GNG12Q9UBI6 72 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 B8ZZF3 427 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 KLF4O43474 513 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 RPS16P62249 146 aaKnown RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ATP1A1-AS1Q5TC04 95 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ZBTB37Q5TC79 503 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 OR8G2PQ6IF36 304 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 KCNRGQ8N5I3 272 aa7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 HDHD3Q9BSH5 251 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-222ENST00000615540 ELLP55199 621 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 DHRS2Q13268 280 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 HIKESHIQ53FT3 197 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 OR1J1Q8NGS3 322 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PSMB6P28072 239 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SRD5A2P31213 254 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 GSK3AP49840 483 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SIGLEC14Q08ET2 396 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PIGYQ3MUY2 71 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PLA1AQ53H76 456 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 RNF141Q8WVD5 230 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 CXorf58Q96LI9 332 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ZFP64Q9NPA5 681 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SPAARA0A1B0GVQ0 90 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PIN1P1O15428 100 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ATG12O94817 140 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 IFNA1P01562 189 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SOX8P57073 446 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 IGLV3-21P80748 117 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 TOR2AQ5JU69 321 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF574Q6ZN55 896 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 OR10V1Q8NGI7 309 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 TCTEX1D2Q8WW35 142 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 UQCC2Q9BRT2 126 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PUS1Q9Y606 427 aaKnown RBP eCLIP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 CTDSPLO15194 276 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 UPK3AO75631 287 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 MRPS34P82930 218 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 FOXC1Q12948 553 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 TSPO2Q5TGU0 170 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ZFP82Q8N141 532 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ADPRHL1Q8NDY3 354 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 DEFB108BQ8NET1 73 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC30A7Q8NEW0 376 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 SRXN1Q9BYN0 137 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 RTN4RQ9BZR6 473 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ZFP57Q9NU63 452 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ANAPC1Q9H1A4 1944 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 DEFB108AA8MXU0 73 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ENSAO43768 121 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 GSTP1P09211 210 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PGA4P0DJD7 388 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 PGA3P0DJD8 388 aa7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF816Q0VGE8 651 aaPredicted RBP7.88□□□□□ -1.15
PDLIM5-222ENST00000615540 C11orf87Q6NUJ2 197 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms