RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 MLF1P58340 268 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 NKPD1Q17RQ9 610 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 WBP2NLQ6ICG8 309 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 PODNL1Q6PEZ8 512 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 ASCL5Q7RTU5 278 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 GTPBP8Q8N3Z3 284 aaPredicted RBP7.8□□□□□ -1.16
VPS11-206ENST00000614944 SLC35G3Q8N808 338 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 OR4A4PQ8NGN8 299 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SLC7A13Q8TCU3 470 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 WFDC6Q9BQY6 131 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SPIN1Q9Y657 262 aaPredicted RBP7.8□□□□□ -1.16
VPS11-206ENST00000614944 PCSK5Q92824 1860 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SDK2Q58EX2 2172 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 TRBV4-1A0A0J9YWV2 114 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.8□□□□□ -1.16
VPS11-206ENST00000614944 FAM183AA6NL82 134 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 TNFSF15O95150 251 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 THY1P04216 161 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 PSMB10P40306 273 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 CRYBA4P53673 196 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SPHARQ15513 63 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 HMGN3Q15651 99 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 ADIPOQQ15848 244 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 C5orf64Q2M2E5 130 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SLC22A25Q6T423 547 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 HEPN1Q6WQI6 88 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 RBM45Q8IUH3 476 aaKnown RBP7.8□□□□□ -1.16
VPS11-206ENST00000614944 ZNF100Q8IYN0 542 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 SLC5A8Q8N695 610 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 EXD3Q8N9H8 876 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 OR10Q1Q8NGQ4 319 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 OR4C3Q8NH37 302 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 NKD1Q969G9 470 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 RERGLQ9H628 205 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 AKIRIN1Q9H9L7 192 aaPredicted RBP7.8□□□□□ -1.16
VPS11-206ENST00000614944 TIMM10BQ9Y5J6 103 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 KPTNQ9Y664 436 aa7.8□□□□□ -1.16
VPS11-206ENST00000614944 NSG1A0A0A6YYJ2 146 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 A0A1W2PPE2 198 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 ZAR1LA6NP61 321 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BKO60814 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BJP06899 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 LIPCP11150 499 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 TCN2P20062 427 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BOP23527 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BBP33778 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 P2RX1P51575 399 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 CAV3P56539 151 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 CLDN18P56856 261 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BDP58876 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 ERVFRD-1P60508 538 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BCP62807 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST2H2BEQ16778 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 AWAT1Q58HT5 328 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 LDLRAD2Q5SZI1 272 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 OR2M7Q8NG81 312 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 OR5W2Q8NH69 310 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HPSE2Q8WWQ2 592 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 ST8SIA1Q92185 356 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BHQ93079 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 TECTBQ96PL2 329 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 FEVQ99581 238 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BNQ99877 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HIST1H2BMQ99879 126 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 SLC6A7Q99884 636 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 ZNF471Q9BX82 626 aaPredicted RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 TMEM185BQ9H7F4 350 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 GPN1Q9HCN4 374 aaPredicted RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 CNIH4Q9P003 139 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 CACFD1Q9UGQ2 172 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 PSG11Q9UQ72 335 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 GSTK1Q9Y2Q3 226 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 FAM96BQ9Y3D0 163 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 FLVCR1Q9Y5Y0 555 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 NCOR1O75376 2440 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 ANKUB1A6NFN9 424 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 PRKNO60260 465 aaPredicted RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 CREBL2O60519 120 aaPredicted RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 RBMS1P29558 406 aaKnown RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 PAX5Q02548 391 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 UBE2V2Q15819 145 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 IDNKQ5T6J7 187 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 C12orf73Q69YU5 71 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 NHLRC1Q6VVB1 395 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 OR14L1PQ8NHC6 308 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 BRIX1Q8TDN6 353 aaKnown RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 ATF6BQ99941 703 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 CITED1Q99966 193 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 HINT2Q9BX68 163 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 DEFB126Q9BYW3 111 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 DPH1Q9BZG8 443 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 METTL7AQ9H8H3 244 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 RHOFQ9HBH0 211 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 TMEM140Q9NV12 185 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 CNOT2Q9NZN8 540 aaKnown RBP7.79□□□□□ -1.16
VPS11-206ENST00000614944 FLVCR2Q9UPI3 526 aa7.79□□□□□ -1.16
VPS11-206ENST00000614944 TBL2Q9Y4P3 447 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms