RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 METTL8Q9H825 291 aaKnown RBP15.1■□□□□ 0.01
NEK3-206ENST00000611833 RAB18Q9NP72 206 aa15.1■□□□□ 0.01
NEK3-206ENST00000611833 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.1■□□□□ 0.01
NEK3-206ENST00000611833 NSG1A0A0A6YYJ2 146 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 A0A0J9YW62 118 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 HPNP05981 417 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 GP1BAP07359 652 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 ZNF133P52736 654 aaPredicted RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 PEG10Q86TG7 708 aaKnown RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 CCDC36Q8IYA8 594 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 ROBO4Q8WZ75 1007 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 HAS2Q92819 552 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 PIK3IP1Q96FE7 263 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 NARS2Q96I59 477 aaKnown RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 RNF126Q9BV68 326 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 LDAHQ9H6V9 325 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 PRDM6Q9NQX0 595 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 SERPINE3A8MV23 424 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 GLRA1P23415 457 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 CPT2P23786 658 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 RAC1P63000 192 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 HIST1H3AP68431 136 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 MC2RQ01718 297 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 RSPO4Q2I0M5 234 aaPredicted RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 HIST2H3PS2Q5TEC6 136 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 AADACL3Q5VUY0 350 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 HIST2H3AQ71DI3 136 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 Q7L0L9 218 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 LHFPL1Q86WI0 220 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 BOLLQ8N9W6 283 aaKnown RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 INTS12Q96CB8 462 aaKnown RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 ZC3H10Q96K80 434 aaKnown RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 NECAB3Q96P71 396 aaPredicted RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 PIGQQ9BRB3 760 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 ZNF701Q9NV72 531 aaPredicted RBP15.09■□□□□ 0.01
NEK3-206ENST00000611833 OSGIN2Q9Y236 505 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 PCDHGA1Q9Y5H4 931 aa15.09■□□□□ 0.01
NEK3-206ENST00000611833 SDK2Q58EX2 2172 aa15.08■□□□□ 0.01
NEK3-206ENST00000611833 MUC3AQ02505 3323 aa15.08■□□□□ 0
NEK3-206ENST00000611833 A0A0B4J2A0 478 aa15.08■□□□□ 0
NEK3-206ENST00000611833 TEX13DA0A0J9YY54 714 aaPredicted RBP15.08■□□□□ 0
NEK3-206ENST00000611833 FOXI3A8MTJ6 420 aaPredicted RBP15.08■□□□□ 0
NEK3-206ENST00000611833 NUPL2O15504 423 aaKnown RBP15.08■□□□□ 0
NEK3-206ENST00000611833 CBR3O75828 277 aa15.08■□□□□ 0
NEK3-206ENST00000611833 TPT1P13693 172 aaKnown RBP15.08■□□□□ 0
NEK3-206ENST00000611833 SUPT4H1P63272 117 aaKnown RBP15.08■□□□□ 0
NEK3-206ENST00000611833 TRA2AQ13595 282 aaKnown RBP eCLIP15.08■□□□□ 0
NEK3-206ENST00000611833 ARL6IP1Q15041 203 aa15.08■□□□□ 0
NEK3-206ENST00000611833 ANKRD55Q3KP44 614 aa15.08■□□□□ 0
NEK3-206ENST00000611833 BPIFCQ8NFQ6 507 aa15.08■□□□□ 0
NEK3-206ENST00000611833 FBXO17Q96EF6 278 aa15.08■□□□□ 0
NEK3-206ENST00000611833 C12orf4Q9NQ89 552 aa15.08■□□□□ 0
NEK3-206ENST00000611833 SHPKQ9UHJ6 478 aa15.08■□□□□ 0
NEK3-206ENST00000611833 FOXD3Q9UJU5 478 aaPredicted RBP15.08■□□□□ 0
NEK3-206ENST00000611833 TRBV6-7A0A0A0MS04 114 aa15.08■□□□□ 0
NEK3-206ENST00000611833 GABRR1P24046 479 aa15.08■□□□□ 0
NEK3-206ENST00000611833 OTX1P32242 354 aaPredicted RBP15.08■□□□□ 0
NEK3-206ENST00000611833 DEFA5Q01523 94 aa15.08■□□□□ 0
NEK3-206ENST00000611833 SLC16A14Q7RTX9 510 aa15.08■□□□□ 0
NEK3-206ENST00000611833 ZIC4Q8N9L1 334 aa15.08■□□□□ 0
NEK3-206ENST00000611833 ZNF837Q96EG3 531 aaPredicted RBP15.08■□□□□ 0
NEK3-206ENST00000611833 TM2D1Q9BX74 207 aa15.08■□□□□ 0
NEK3-206ENST00000611833 PIGMQ9H3S5 423 aa15.08■□□□□ 0
NEK3-206ENST00000611833 ZC4H2Q9NQZ6 224 aa15.08■□□□□ 0
NEK3-206ENST00000611833 ASF1BQ9NVP2 202 aa15.08■□□□□ 0
NEK3-206ENST00000611833 FREM2Q5SZK8 3169 aa15.07■□□□□ 0
NEK3-206ENST00000611833 GJE1A6NN92 205 aa15.07■□□□□ 0
NEK3-206ENST00000611833 MPTX1A8MV57 137 aa15.07■□□□□ 0
NEK3-206ENST00000611833 MLF1P58340 268 aa15.07■□□□□ 0
NEK3-206ENST00000611833 ZNF273Q14593 569 aa15.07■□□□□ 0
NEK3-206ENST00000611833 SNAI3Q3KNW1 292 aa15.07■□□□□ 0
NEK3-206ENST00000611833 PEAR1Q5VY43 1037 aaPredicted RBP15.07■□□□□ 0
NEK3-206ENST00000611833 C20orf196Q8IYI0 205 aa15.07■□□□□ 0
NEK3-206ENST00000611833 ZSCAN4Q8NAM6 433 aaPredicted RBP15.07■□□□□ 0
NEK3-206ENST00000611833 CCDC54Q8NEL0 328 aa15.07■□□□□ 0
NEK3-206ENST00000611833 C10orf35Q96D05 121 aa15.07■□□□□ 0
NEK3-206ENST00000611833 RRNAD1Q96FB5 475 aaKnown RBP15.07■□□□□ 0
NEK3-206ENST00000611833 SRXN1Q9BYN0 137 aa15.07■□□□□ 0
NEK3-206ENST00000611833 GPR173Q9NS66 373 aa15.07■□□□□ 0
NEK3-206ENST00000611833 PLEKHJ1Q9NW61 149 aa15.07■□□□□ 0
NEK3-206ENST00000611833 RTTNQ86VV8 2226 aa15.07■□□□□ 0
NEK3-206ENST00000611833 H0YIZ8 118 aa15.06■□□□□ 0
NEK3-206ENST00000611833 SIGLEC5O15389 551 aa15.06■□□□□ 0
NEK3-206ENST00000611833 TMEM225BP0DP42 221 aa15.06■□□□□ 0
NEK3-206ENST00000611833 FOLR3P41439 243 aa15.06■□□□□ 0
NEK3-206ENST00000611833 MTCP1P56278 107 aa15.06■□□□□ 0
NEK3-206ENST00000611833 SIGLEC14Q08ET2 396 aa15.06■□□□□ 0
NEK3-206ENST00000611833 AIMP2Q13155 320 aaKnown RBP15.06■□□□□ 0
NEK3-206ENST00000611833 NKAPLQ5M9Q1 402 aa15.06■□□□□ 0
NEK3-206ENST00000611833 FAM27BQ5VT28 67 aa15.06■□□□□ 0
NEK3-206ENST00000611833 RTL6Q6ICC9 239 aa15.06■□□□□ 0
NEK3-206ENST00000611833 ATRAIDQ6UW56 229 aa15.06■□□□□ 0
NEK3-206ENST00000611833 GALNTL5Q7Z4T8 443 aa15.06■□□□□ 0
NEK3-206ENST00000611833 C6orf201Q7Z4U5 140 aa15.06■□□□□ 0
NEK3-206ENST00000611833 OR52H1Q8NGJ2 320 aa15.06■□□□□ 0
NEK3-206ENST00000611833 OR1S2Q8NGQ3 325 aa15.06■□□□□ 0
NEK3-206ENST00000611833 STOML3Q8TAV4 291 aa15.06■□□□□ 0
NEK3-206ENST00000611833 EMG1Q92979 244 aaKnown RBP15.06■□□□□ 0
NEK3-206ENST00000611833 MARC2Q969Z3 335 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms