RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FOXJ2Q9P0K8 574 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 GHRLQ9UBU3 117 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 NDRG3Q9UGV2 375 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 DOCK9Q9BZ29 2069 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 PYCARD-AS1I3L0S3 204 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ENSAO43768 121 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CTAG2O75638 210 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TSPAN9O75954 239 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 LSM6P62312 80 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 GNG3P63215 75 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SHEQ5VZ18 495 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 LGI3Q8N145 548 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ARHGEF39Q8N4T4 335 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 OR5T1Q8NG75 326 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CHRNA10Q9GZZ6 450 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 HRH4Q9H3N8 390 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 MRPS18AQ9NVS2 196 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 FLVCR1Q9Y5Y0 555 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 DOCK7Q96N67 2140 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 IGKV1D-42A0A075B6H8 117 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 H7C1Q1 480 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 GPR137BO60478 399 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 IFNA2P01563 188 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 IFNA4P05014 189 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 OR4E1P0C645 316 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 SNRPNP63162 240 aaKnown RBP6.43□□□□□ -1.38
CSDE1-218ENST00000610726 CFHR1Q03591 330 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 RNLSQ5VYX0 342 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 C6orf201Q7Z4U5 140 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 OR2Z1Q8NG97 314 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 ASB5Q8WWX0 329 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 DDA1Q9BW61 102 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 ANGPTL4Q9BY76 406 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 MSTNO14793 375 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 RECKO95980 971 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 CDC20Q12834 499 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 PRDX4Q13162 271 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 MYO7BQ6PIF6 2116 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 HSD17B11Q8NBQ5 300 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 OR6K3Q8NGY3 331 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 RNF133Q8WVZ7 376 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 ADAT1Q9BUB4 502 aaKnown RBP6.43□□□□□ -1.38
CSDE1-218ENST00000610726 GPR35Q9HC97 309 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 PPP1R3CQ9UQK1 317 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 NEUROG3Q9Y4Z2 214 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 KIF26BQ2KJY2 2108 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 IGKV3D-11A0A0A0MRZ8 115 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 RNF212BA8MTL3 300 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 SULT1C2O00338 296 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 CLDN1O95832 211 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 ACTL6AO96019 429 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 TMIGD3P0DMS9 266 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-218ENST00000610726 FUT3P21217 361 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 TGM1P22735 817 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 PLA2G7Q13093 441 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 HIKESHIQ53FT3 197 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 FGF11Q92914 225 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 EXTL1Q92935 676 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 ARL11Q969Q4 196 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 UQCC2Q9BRT2 126 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 FAAP24Q9BTP7 215 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 MIXL1Q9H2W2 232 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 RNF150Q9ULK6 438 aa6.43□□□□□ -1.38
CSDE1-218ENST00000610726 A0A0D9SG52 128 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 NKX6-3A6NJ46 265 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SERPINE3A8MV23 424 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF354AO60765 605 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ADAM11O75078 769 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 GLAP06280 429 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 CD82P27701 267 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 S100A11P31949 105 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SERPINF1P36955 418 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SNCAP37840 140 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 EGR4Q05215 589 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 RFPL4BQ6ZWI9 263 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 PPP1R32Q7Z5V6 425 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 GVQW1Q8N7I0 195 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ADPRHL1Q8NDY3 354 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 TCTEX1D2Q8WW35 142 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SLC25A31Q9H0C2 315 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ABCA4P78363 2273 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 LOC101059948A0A1B0GTJ6 334 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM200CA6NKL6 621 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 FAM90A27PA6NNH2 459 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 F8W036 122 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 CYC1P08574 325 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 TUBG1P23258 451 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 MMP16P51512 607 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 LUMP51884 338 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-218ENST00000610726 BLOC1S1P78537 153 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM200AQ86VY9 491 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 CATSPERDQ86XM0 798 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 OR2AK2Q8NG84 335 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 TERB2Q8NHR7 220 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SULT4A1Q9BR01 284 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 NMNAT2Q9BZQ4 307 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 PLEKHF2Q9H8W4 249 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 MTFP1Q9UDX5 166 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SNRNP200O75643 2136 aaKnown RBP6.42□□□□□ -1.38
CSDE1-218ENST00000610726 MS4A18H0YCH9 400 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms