RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 GFERP55789 205 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 CLRN1P58418 232 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 FABP9Q0Z7S8 132 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 SLC16A14Q7RTX9 510 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 RNF144BQ7Z419 303 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 CCDC54Q8NEL0 328 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.69■□□□□ 0.74
SHANK2-220ENST00000608988 HPNP05981 417 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 CTSSP25774 331 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 EIF2S3P41091 472 aaKnown RBP19.69■□□□□ 0.74
SHANK2-220ENST00000608988 SLC25A47Q6Q0C1 308 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 OR14K1Q8NGZ2 314 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 MMP17Q9ULZ9 603 aa19.69■□□□□ 0.74
SHANK2-220ENST00000608988 RHPN2P1A8MT19 583 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 AP4M1O00189 453 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 SDCBPO00560 298 aaPredicted RBP19.68■□□□□ 0.74
SHANK2-220ENST00000608988 GPR137BO60478 399 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 ZNF17P17021 662 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 ACKR3P25106 362 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 BLVRBP30043 206 aaPredicted RBP19.68■□□□□ 0.74
SHANK2-220ENST00000608988 ZNF133P52736 654 aaPredicted RBP19.68■□□□□ 0.74
SHANK2-220ENST00000608988 MIDNQ504T8 468 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 SLC25A53Q5H9E4 307 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 FAM209BQ5JX69 171 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 GGNBP1Q5YKI7 109 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 UEVLDQ8IX04 471 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 TMPRSS5Q9H3S3 457 aa19.68■□□□□ 0.74
SHANK2-220ENST00000608988 GATCO43716 136 aaKnown RBP19.67■□□□□ 0.74
SHANK2-220ENST00000608988 SNRNP70P08621 437 aaKnown RBP19.67■□□□□ 0.74
SHANK2-220ENST00000608988 PGA4P0DJD7 388 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 PGA3P0DJD8 388 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 LMO1P25800 156 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 P2RY1P47900 373 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 C17orf82Q86X59 251 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-220ENST00000608988 SHDQ96IW2 340 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 FAM71F1Q96KD3 344 aaPredicted RBP19.67■□□□□ 0.74
SHANK2-220ENST00000608988 B3GAT1Q9P2W7 334 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 KNG1P01042 644 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 MSX1P28360 303 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 EFNA3P52797 238 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 FAM219AQ8IW50 185 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 PLPP5Q8NEB5 264 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 SPACA1Q9HBV2 294 aa19.67■□□□□ 0.74
SHANK2-220ENST00000608988 PNRC2Q9NPJ4 139 aaKnown RBP19.67■□□□□ 0.74
SHANK2-220ENST00000608988 ALPK2Q86TB3 2170 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 IGKV1-9A0A0C4DH69 117 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 A0A1W2PP11 408 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 A6NLC8 198 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 M0R036 132 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 IFNA17P01571 189 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 IGLV3-1P01715 115 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 FOSL2P15408 326 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 ACY1Q03154 408 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 KISS1Q15726 138 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 AKIRIN2Q53H80 203 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 ETV3LQ6ZN32 361 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 FOXRED2Q8IWF2 684 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 LRTM2Q8N967 370 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 SEMA6DQ8NFY4 1073 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 MRGPRX4Q96LA9 322 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 SLC35B3Q9H1N7 401 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 C19orf12Q9NSK7 152 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 KCNIP3Q9Y2W7 256 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 PIAS3Q9Y6X2 628 aa19.66■□□□□ 0.74
SHANK2-220ENST00000608988 A0A1W2PPH5 198 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 YKT6O15498 198 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 CAMLGP49069 296 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 PPM1FP49593 454 aaPredicted RBP19.65■□□□□ 0.74
SHANK2-220ENST00000608988 RNF4P78317 190 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 FOXF1Q12946 379 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 OR6X1Q8NH79 312 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 RNF138Q8WVD3 245 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 PP6455Q8WZ26 134 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 C10orf35Q96D05 121 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 EMC6Q9BV81 110 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 VN1R1Q9GZP7 353 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 LSM5Q9Y4Y9 91 aaKnown RBP19.65■□□□□ 0.74
SHANK2-220ENST00000608988 A0A1W2PPC4 97 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 ID4P47928 161 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 SLC35A1P78382 337 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 KRBOX4Q5JUW0 171 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 RPUSD3Q6P087 351 aaKnown RBP19.65■□□□□ 0.74
SHANK2-220ENST00000608988 Q6ZSR3 168 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 ZNF283Q8N7M2 679 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 ZNF2Q9BSG1 426 aaPredicted RBP19.65■□□□□ 0.74
SHANK2-220ENST00000608988 SDHAF3Q9NRP4 125 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 MIOXQ9UGB7 285 aa19.65■□□□□ 0.74
SHANK2-220ENST00000608988 NOSIPQ9Y314 301 aaKnown RBP19.65■□□□□ 0.74
SHANK2-220ENST00000608988 UMAD1C9J7I0 102 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 WRBO00258 174 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 OR8U8P0C7N1 319 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 NR2C1P13056 603 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 CBR1P16152 277 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 IL13RA2Q14627 380 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 GALNT14Q96FL9 552 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 S100A13Q99584 98 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 SUCNR1Q9BXA5 334 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 EIF5A2Q9GZV4 153 aaKnown RBP19.64■□□□□ 0.73
SHANK2-220ENST00000608988 PADI1Q9ULC6 663 aa19.64■□□□□ 0.73
SHANK2-220ENST00000608988 A0A0U1RQV5 110 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms