RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ACAA1P09110 424 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 PRR23D2P0DMB1 279 aaPredicted RBP10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 NDUFB7P17568 137 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 PAICSP22234 425 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 GLRA1P23415 457 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 SAA4P35542 130 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 GABRA2P47869 451 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 MNAT1P51948 309 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 UBE2E1P51965 193 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 GYS2P54840 703 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 TRIM25Q14258 630 aaKnown RBP10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 PLBD1Q6P4A8 553 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 GIPC3Q8TF64 312 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 HIST1H2AAQ96QV6 131 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 ABCB9Q9NP78 766 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 TAS2R1Q9NYW7 299 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 NLKQ9UBE8 527 aa10.95□□□□□ -0.66
POLR2J3-219ENST00000608621 A0A0G2JK05 382 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 A0A1W2PQ09 198 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 ANKRD61A6NGH8 418 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 OR2AT4A6NND4 320 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 M0R1W7 72 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 SIGLEC5O15389 551 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 RHBDL1O75783 438 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 DCTDP32321 178 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 CAV3P56539 151 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 EGR3Q06889 387 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 BLMHQ13867 455 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 GINS1Q14691 196 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 C1QL4Q86Z23 238 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 ZDHHC23Q8IYP9 409 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 ARHGAP24Q8N264 748 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 OR8B12Q8NGG6 310 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 OR5R1Q8NH85 324 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 HPSE2Q8WWQ2 592 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 NSL1Q96IY1 281 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 PPA2Q9H2U2 334 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 MUC13Q9H3R2 512 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 ELL3Q9HB65 397 aaPredicted RBP10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 KLHDC2Q9Y2U9 406 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
POLR2J3-219ENST00000608621 CST1P01037 141 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 PSG2P11465 335 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 MAP2K3P46734 347 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 GPM6AP51674 278 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 HCCSP53701 268 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 GNGT1P63211 74 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 ACSM1Q08AH1 577 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 DMRTC1Q5HYR2 192 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 NCR3LG1Q68D85 454 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 TMEM179BQ7Z7N9 219 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 CPOQ8IVL8 374 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 ZNRF1Q8ND25 227 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 PAPD5Q8NDF8 572 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 BEND2Q8NDZ0 799 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 NIPAL2Q9H841 368 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 FBLN5Q9UBX5 448 aa10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 SF3B6Q9Y3B4 125 aaKnown RBP10.93□□□□□ -0.66
POLR2J3-219ENST00000608621 IGKV1D-17A0A075B6S4 117 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 ZNF732B4DXR9 585 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 H0YAE9 185 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 H3BUX3 64 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 HMGN1P05114 100 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 CSF1P09603 554 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 RAP2AP10114 183 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 ALOX5APP20292 161 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 PSMA6P60900 246 aaKnown RBP10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 GNG3P63215 75 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 GK3PQ14409 553 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 LY6EQ16553 131 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 C2orf68Q2NKX9 166 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 CEP78Q5JTW2 689 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 KRT77Q7Z794 578 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 TMEM185AQ8NFB2 350 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 PPP1R35Q8TAP8 253 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 ZNF671Q8TAW3 534 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 FAM81AQ8TBF8 368 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 C17orf50Q8WW18 174 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 RORBQ92753 470 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 SSX3Q99909 188 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 CHID1Q9BWS9 393 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 OR51I2Q9H344 312 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 YY1AP1Q9H869 796 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 SIGLEC9Q9Y336 463 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
POLR2J3-219ENST00000608621 PRKDCP78527 4128 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 ARRDC5A6NEK1 342 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 PSMD9O00233 223 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 GNGT2O14610 69 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 PRODHO43272 600 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 GABRA5P31644 462 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 RPS7P62081 194 aaKnown RBP10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 CDK5Q00535 292 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 CEACAM21Q3KPI0 293 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 SLC35D3Q5M8T2 416 aa10.91□□□□□ -0.66
POLR2J3-219ENST00000608621 MOB3CQ70IA8 216 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms