RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ERVFRD-1P60508 538 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 HTR4Q13639 388 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF235Q14590 738 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF77Q15935 545 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 C1orf194Q5T5A4 169 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SDHAF4Q5VUM1 108 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ADAM5Q6NVV9 412 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CNIH2Q6PI25 160 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC35E3Q7Z769 313 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 H1FOOQ8IZA3 346 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR10G3Q8NGC4 313 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1S2Q8NGQ3 325 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR6N1Q8NGY5 312 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR4S2Q8NH73 311 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR56B4Q8NH76 319 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 GNPDA2Q8TDQ7 276 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 RPEQ96AT9 228 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ATP5SQ99766 215 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 VN1R3Q9BXE9 311 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 MMP26Q9NRE1 261 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ASF1BQ9NVP2 202 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 AURKAIP1Q9NWT8 199 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 IL36GQ9NZH8 169 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 NTMQ9P121 344 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 LHX3Q9UBR4 397 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PLEKHB1Q9UF11 243 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 DUSP13Q9UII6 198 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 IKZF2Q9UKS7 526 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 BTRCQ9Y297 605 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 EXOSC1Q9Y3B2 195 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 HES2Q9Y543 173 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 IGHV2-70DA0A0C4DH43 119 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 C2CD4BA6NLJ0 364 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 A8MVM7 634 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TNFSF11O14788 317 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 WDR1O75083 606 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 NCR1O76036 304 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF432O94892 652 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 VENTXO95231 258 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ESR1P03372 595 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 UMODP07911 640 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SOD3P08294 240 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CST2P09228 141 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 FABP4P15090 132 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 APLNRP35414 380 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 LGALS7P47929 136 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PRLHRP49683 370 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PRR5P85299 388 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC25A11Q02978 314 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TLE3Q04726 772 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC36A2Q495M3 483 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 UNC50Q53HI1 259 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 EMC4Q5J8M3 183 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 DUX4L9Q6RFH8 374 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 HIST2H3AQ71DI3 136 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 Q7L0L9 218 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CFAP52Q8N1V2 620 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR9I1Q8NGQ6 314 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR1F12Q8NHA8 337 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ARRDC2Q8TBH0 407 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM174Q8WUU8 243 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 RGP1Q92546 391 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SMARCD2Q92925 531 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 POP5Q969H6 163 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 NEIL2Q969S2 332 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC6A7Q99884 636 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2J1Q9GZK6 312 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CST9LQ9H4G1 147 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 DHX35Q9H5Z1 703 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ALG9Q9H6U8 611 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 NMRAL1Q9HBL8 299 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 WFDC1Q9HC57 220 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 AMBNQ9NP70 447 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TCRBV5S1A1TA0A578 114 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 DDTLA6NHG4 134 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 G3V4G9 280 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 FXYD1O00168 92 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 MANBAO00462 879 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 MSTNO14793 375 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 FGF16O43320 207 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 MFSD11O43934 449 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TNFSF15O95150 251 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 HPRT1P00492 218 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PTHP01270 115 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 IGLV1-40P01703 118 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 WNT2P09544 360 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 AKR1C4P17516 323 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 KITLGP21583 273 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 SSTR5P35346 364 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 GYG1P46976 350 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF84P51523 738 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CAV2P51636 162 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TIAL1Q01085 375 aaKnown RBP eCLIP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 TP53I3Q53FA7 332 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 FAHD1Q6P587 224 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF613Q6PF04 617 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms