RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PNKDQ8N490 385 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 ZNF454Q8N9F8 522 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 ANGPTL6Q8NI99 470 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 HPSE2Q8WWQ2 592 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 TNFRSF14Q92956 283 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 ABCB9Q9NP78 766 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 TAS2R1Q9NYW7 299 aa10.78□□□□□ -0.68
RPS28-204ENST00000602140 SLC25A10Q9UBX3 287 aaPredicted RBP10.78□□□□□ -0.68
RPS28-204ENST00000602140 WNK1Q9H4A3 2382 aa10.77□□□□□ -0.68
RPS28-204ENST00000602140 ZNF816-ZNF321PA0A0X1KG74 233 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 A0A1W2PQ09 198 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 SLC22A31A6NKX4 558 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 SIGLEC5O15389 551 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 TSPAN9O75954 239 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 CST1P01037 141 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 ACAA1P09110 424 aaPredicted RBP10.77□□□□□ -0.69
RPS28-204ENST00000602140 RAP2AP10114 183 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 NDUFB7P17568 137 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 DCTDP32321 178 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 GABRA2P47869 451 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 PSMA6P60900 246 aaKnown RBP10.77□□□□□ -0.69
RPS28-204ENST00000602140 GINS1Q14691 196 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 OR8B12Q8NGG6 310 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 NSL1Q96IY1 281 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 HIST1H2AAQ96QV6 131 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 METTL8Q9H825 291 aaKnown RBP10.77□□□□□ -0.69
RPS28-204ENST00000602140 NLKQ9UBE8 527 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 KLHDC2Q9Y2U9 406 aa10.77□□□□□ -0.69
RPS28-204ENST00000602140 ANKRD61A6NGH8 418 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 OR2AT4A6NND4 320 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 M0R1W7 72 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 RHBDL1O75783 438 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 GLRA1P23415 457 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 GPM6AP51674 278 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 UBE2E1P51965 193 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 CAV3P56539 151 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 EGR3Q06889 387 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 BLMHQ13867 455 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 GK3PQ14409 553 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 NCR3LG1Q68D85 454 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 OR5R1Q8NH85 324 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 FAM110DQ8TAY7 271 aaPredicted RBP10.76□□□□□ -0.69
RPS28-204ENST00000602140 FAM81AQ8TBF8 368 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 DUS3LQ96G46 650 aaKnown RBP10.76□□□□□ -0.69
RPS28-204ENST00000602140 LRGUKQ96M69 825 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 CHID1Q9BWS9 393 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 PPA2Q9H2U2 334 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 ELL3Q9HB65 397 aaPredicted RBP10.76□□□□□ -0.69
RPS28-204ENST00000602140 LRP12Q9Y561 859 aa10.76□□□□□ -0.69
RPS28-204ENST00000602140 IGKV1D-17A0A075B6S4 117 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 ARRDC5A6NEK1 342 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 ZNF732B4DXR9 585 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 PRODHO43272 600 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 HMGN1P05114 100 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 MAP2K3P46734 347 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 HCCSP53701 268 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 RPS7P62081 194 aaKnown RBP10.75□□□□□ -0.69
RPS28-204ENST00000602140 GNG3P63215 75 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 ACSM1Q08AH1 577 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 C2orf68Q2NKX9 166 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 DMRTC1Q5HYR2 192 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 CEP78Q5JTW2 689 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 KRT77Q7Z794 578 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 C1QL4Q86Z23 238 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 CPOQ8IVL8 374 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 ZNRF1Q8ND25 227 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 PAPD5Q8NDF8 572 aaKnown RBP10.75□□□□□ -0.69
RPS28-204ENST00000602140 BBS1Q8NFJ9 593 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 CCDC124Q96CT7 223 aaKnown RBP10.75□□□□□ -0.69
RPS28-204ENST00000602140 OR51I2Q9H344 312 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 NIPAL2Q9H841 368 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 LAMP5Q9UJQ1 280 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 MAB21L2Q9Y586 359 aa10.75□□□□□ -0.69
RPS28-204ENST00000602140 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
RPS28-204ENST00000602140 A0A0G2JK05 382 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 H0YAE9 185 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 H3BUX3 64 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 PSMD9O00233 223 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 GNGT2O14610 69 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 PSG2P11465 335 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 OSMP13725 252 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 ALOX5APP20292 161 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 CDK5Q00535 292 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 CEACAM21Q3KPI0 293 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 SLC35D3Q5M8T2 416 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 HCP5Q6MZN7 132 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 ADGRG5Q8IZF4 528 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 HS3ST5Q8IZT8 346 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 FAM185AQ8N0U4 392 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 BEND2Q8NDZ0 799 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 TMEM185AQ8NFB2 350 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 ZNF671Q8TAW3 534 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 C17orf50Q8WW18 174 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 ASB9Q96DX5 294 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 CLPTM1LQ96KA5 538 aa10.74□□□□□ -0.69
RPS28-204ENST00000602140 SSX3Q99909 188 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms