RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 A0A1B0GW55 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 NKX6-3A6NJ46 265 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 IGLV3-1P01715 115 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 CRYBA1P05813 215 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 MELTFP08582 738 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L2P0CJ85 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L3P0CJ86 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L4P0CJ87 422 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L5P0CJ88 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L6P0CJ89 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L7P0CJ90 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 RIDAP52758 137 aaKnown RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 GNG3P63215 75 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 EFNB1P98172 346 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 ATP6AP1Q15904 470 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 ZNF829Q3KNS6 432 aaPredicted RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4L9Q6RFH8 374 aaPredicted RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 ZNF788Q6ZQV5 615 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 C1orf122Q6ZSJ8 110 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 MEPCEQ7L2J0 689 aaKnown RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 FAM216BQ8N7L0 139 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 OR5A2Q8NGI9 324 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 ZNF671Q8TAW3 534 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 TBC1D15Q8TC07 691 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 CNN2Q99439 309 aaKnown RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 DCTN5Q9BTE1 182 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 FGF23Q9GZV9 251 aaPredicted RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 OR51I2Q9H344 312 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 DUX4Q9UBX2 424 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 NUFIP1Q9UHK0 495 aaKnown RBP13.03□□□□□ -0.32
VRK3-221ENST00000600284 ENOPH1Q9UHY7 261 aa13.03□□□□□ -0.32
VRK3-221ENST00000600284 FAM181BA6NEQ2 426 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 SLC22A31A6NKX4 558 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 G3V2T6 193 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 AKR7A2O43488 359 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 PRKYO43930 277 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.33
VRK3-221ENST00000600284 ATP5HO75947 161 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
VRK3-221ENST00000600284 GPM6AP51674 278 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
VRK3-221ENST00000600284 IKZF1Q13422 519 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 AADACL4Q5VUY2 407 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 SLX4IPQ5VYV7 408 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 NXNL2Q5VZ03 156 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 KDM4DQ6B0I6 523 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 THAP5Q7Z6K1 395 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 LDLRAD3Q86YD5 345 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 OR5T2Q8NGG2 359 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 ANGPTL6Q8NI99 470 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
VRK3-221ENST00000600284 WDR13Q9H1Z4 485 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 BEX1Q9HBH7 125 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 NLKQ9UBE8 527 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 COPS3Q9UNS2 423 aa13.02□□□□□ -0.33
VRK3-221ENST00000600284 CAB39Q9Y376 341 aaPredicted RBP13.02□□□□□ -0.33
VRK3-221ENST00000600284 OR2AT4A6NND4 320 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 ZAR1LA6NP61 321 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 ZNF732B4DXR9 585 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 PSMD9O00233 223 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 SIGLEC5O15389 551 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 NDUFA7O95182 113 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 ACAA1P09110 424 aaPredicted RBP13.01□□□□□ -0.33
VRK3-221ENST00000600284 GLRA1P23415 457 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 FASP25445 335 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 CAV3P56539 151 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 FIP1L1Q6UN15 594 aaKnown RBP13.01□□□□□ -0.33
VRK3-221ENST00000600284 ZDHHC13Q8IUH4 622 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 FGFRL1Q8N441 504 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 OR4F5Q8NH21 305 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 OR51E1Q8TCB6 317 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 DYRK2Q92630 601 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 GAFA1Q96PS6 74 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 CHIAQ9BZP6 476 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 GABARAPL1Q9H0R8 117 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 MOB1AQ9H8S9 216 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 GPR84Q9NQS5 396 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 SNTG1Q9NSN8 517 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 RASL12Q9NYN1 266 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 ONECUT1Q9UBC0 465 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 SLC25A10Q9UBX3 287 aaPredicted RBP13.01□□□□□ -0.33
VRK3-221ENST00000600284 ENPP5Q9UJA9 477 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 IKZF2Q9UKS7 526 aa13.01□□□□□ -0.33
VRK3-221ENST00000600284 PRR32B1ATL7 298 aa13□□□□□ -0.33
VRK3-221ENST00000600284 SRSF10O75494 262 aaKnown RBP13□□□□□ -0.33
VRK3-221ENST00000600284 DHRS3O75911 302 aa13□□□□□ -0.33
VRK3-221ENST00000600284 FCGR1AP12314 374 aa13□□□□□ -0.33
VRK3-221ENST00000600284 MDKP21741 143 aaPredicted RBP13□□□□□ -0.33
VRK3-221ENST00000600284 IER3P46695 156 aa13□□□□□ -0.33
VRK3-221ENST00000600284 CXCR4P61073 352 aa13□□□□□ -0.33
VRK3-221ENST00000600284 EGR3Q06889 387 aa13□□□□□ -0.33
VRK3-221ENST00000600284 C12orf73Q69YU5 71 aa13□□□□□ -0.33
VRK3-221ENST00000600284 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms