RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SCGNO76038 276 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 RAB3DO95716 219 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 CYB5AP00167 134 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 RAB1AP62820 205 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 MAB21L1Q13394 359 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 RBMS2Q15434 407 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 HIKESHIQ53FT3 197 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 FBXW9Q5XUX1 488 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 SPSB4Q96A44 273 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF391Q9UJN7 358 aa14.77□□□□□ -0.05
SHKBP1-216ENST00000598201 PKD1L2Q7Z442 2459 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 C5orf49A4QMS7 147 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF736B4DX44 427 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 CD74P04233 296 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 SERPINA2P20848 420 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 RCVRNP35243 200 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 MECP2P51608 486 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 MTCP1P56278 107 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 ZP1P60852 638 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 RPS27AP62979 156 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 IFITM2Q01629 132 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 OR8B8Q15620 311 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 P4HA3Q7Z4N8 544 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF584Q8IVC4 421 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 CAPSLQ8WWF8 208 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 RAB3CQ96E17 227 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 TAAR6Q96RI8 345 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 GP6Q9HCN6 339 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 USP24Q9UPU5 2620 aa14.76□□□□□ -0.05
SHKBP1-216ENST00000598201 FAM230AA0A1W2PPH8 454 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 XRCC2O43543 280 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 PRAF2O60831 178 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 RAD51DO75771 328 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF735P0CB33 412 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 VSIG10L2P0DP72 767 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 MGMTP16455 207 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 MPGP29372 298 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 OR3A2P47893 321 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 CLVS2Q5SYC1 327 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 OR52W1Q6IF63 320 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 GLDNQ6ZMI3 551 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 FGD2Q7Z6J4 655 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 GCNT2Q8N0V5 402 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 FAM89BQ8N5H3 189 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 OR5M9Q8NGP3 310 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 OR1K1Q8NGR3 316 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 SPSB1Q96BD6 273 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 GMPPAQ96IJ6 420 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 TRIB1Q96RU8 372 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 CST11Q9H112 138 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 NPDC1Q9NQX5 325 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 GHRLQ9UBU3 117 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 MKRN2OSH3BPM6 223 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 AQP7O14520 342 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 SSNA1O43805 119 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 SS18L1O75177 396 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 NRASP01111 189 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 C1QBP02746 253 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 SULT1A3P0DMM9 295 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 SULT1A4P0DMN0 295 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 COX5BP10606 129 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 HIST1H1DP16402 221 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 MRPS15P82914 257 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 METTL11BQ5VVY1 283 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 CDH24Q86UP0 819 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 OR51T1Q8NGJ9 327 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 BCL2L2Q92843 193 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 ARHGAP5-AS1Q96IT6 56 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 PLSCR3Q9NRY6 295 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF107Q9UII5 783 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 ZNF222Q9UK12 451 aa14.75□□□□□ -0.05
SHKBP1-216ENST00000598201 FOXI3A8MTJ6 420 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 AMY2AP04746 511 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 ARR3P36575 388 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 GZMKP49863 264 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 SLC36A1Q7Z2H8 476 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 OR56B1Q8NGI3 324 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 ABHD17AQ96GS6 310 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 POM121L2Q96KW2 1035 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 SLC6A7Q99884 636 aa14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 URM1Q9BTM9 101 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 ELL3Q9HB65 397 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-216ENST00000598201 FABP7O15540 132 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 SPRY1O43609 319 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 ANGPTL7O43827 346 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 PLATP00750 562 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 NGFP01138 241 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 RLN1P04808 185 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 TMEM225BP0DP42 221 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 CNN3Q15417 329 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 LIX1LQ8IVB5 337 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 ZADH2Q8N4Q0 377 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 OR52B4Q8NGK2 314 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 PIGCQ92535 297 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 CHST6Q9GZX3 395 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 CRIM1Q9NZV1 1036 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 ATMQ13315 3056 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 MFNGO00587 321 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 PDGFAP04085 211 aa14.73□□□□□ -0.05
SHKBP1-216ENST00000598201 CSN2P05814 226 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms