RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TRMT61AQ96FX7 289 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 HS3ST6Q96QI5 342 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 CCL19Q99731 98 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 CHST5Q9GZS9 411 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 RBM38Q9H0Z9 239 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 NEK6Q9HC98 313 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ABCB9Q9NP78 766 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 DUSP13Q9UII6 198 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 GPR160Q9UJ42 338 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 PURGQ9UJV8 347 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 PLSCR5A0PG75 271 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 A6NIN4 97 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF701M0R085 212 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 NRASP01111 189 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 ERCC1P07992 297 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 OR4A8P0C604 315 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 KITLGP21583 273 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 SERPINB10P48595 397 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 MTNR1BP49286 362 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 VBP1P61758 197 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 NCS1P62166 190 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 CTF1Q16619 201 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 NKPD1Q17RQ9 610 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 USP43Q70EL4 1123 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 OR13C9Q8NGT0 318 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 PIGCQ92535 297 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 TECTBQ96PL2 329 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 DHRS9Q9BPW9 319 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 TMEM204Q9BSN7 226 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 PLK3Q9H4B4 646 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 ZCCHC4Q9H5U6 513 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 YAE1D1Q9NRH1 226 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 SNTG1Q9NSN8 517 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 MRPL15Q9P015 296 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 CGGBP1Q9UFW8 167 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 FOXJ3Q9UPW0 622 aa10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 NOP16Q9Y3C1 178 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-213ENST00000597325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 ANXA2P2A6NMY6 339 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 E7EQL1 145 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 H3BMQ9 156 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 PDCD5O14737 125 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 MAGEB3O15480 346 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 SULT1B1O43704 296 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 PLAUP00749 431 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 CST4P01036 141 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 IGHV3-13P01766 116 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 MAS1P04201 325 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 RAB3AP20336 220 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 LOXP28300 417 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 SERPINF1P36955 418 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 PRDX4Q13162 271 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 ADIPOQQ15848 244 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 PLCXD3Q63HM9 321 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 UTS2BQ765I0 119 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 FBXL14Q8N1E6 418 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 OR8G5Q8NG78 346 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 OR1M1Q8NGA1 313 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 NEUROG1Q92886 237 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 FBXW5Q969U6 566 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 C12orf43Q96C57 262 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 ORAI1Q96D31 301 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 DGCR14Q96DF8 476 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 CPNE2Q96FN4 548 aaPredicted RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 HIST1H2AAQ96QV6 131 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 ADAT1Q9BUB4 502 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 MRPL37Q9BZE1 423 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 GPR173Q9NS66 373 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 CYSLTR2Q9NS75 346 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 FAIMQ9NVQ4 179 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 CISD1Q9NZ45 108 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 RHBDD3Q9Y3P4 386 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 MPC1Q9Y5U8 109 aa10.27□□□□□ -0.77
SHKBP1-213ENST00000597325 IGLV3-9A0A075B6K5 115 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TRAV8-7A0A075B6U6 113 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TRAV1-2A0A0B4J238 106 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 A6NHS1 94 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 ZNF850A8MQ14 1090 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 RNF223E7ERA6 249 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 PIN1P1O15428 100 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 GMDSO60547 372 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 HCKP08631 526 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 EGR1P18146 543 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 SRMP19623 302 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 PRKACBP22694 351 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 CA6P23280 308 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 CFPP27918 469 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 APOBEC3AP31941 199 aaPredicted RBP10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 OR8G1Q15617 311 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 TMEM42Q69YG0 159 aa10.26□□□□□ -0.77
SHKBP1-213ENST00000597325 HIST2H2BDQ6DRA6 164 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms