RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 GBX2P52951 348 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 HNRNPA0Q13151 305 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 WDR38Q5JTN6 314 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 FAM201AQ5SY85 155 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 WDR86Q86TI4 376 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 C11orf53Q8IXP5 236 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 PRSS35Q8N3Z0 413 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 OR4M2Q8NGB6 313 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 CNIH3Q8TBE1 160 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 LRRC29Q8WV35 223 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 C10orf35Q96D05 121 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 JAM3Q9BX67 310 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 PPP1R3EQ9H7J1 279 aa14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 CHCHD3Q9NX63 227 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-212ENST00000596163 TANC2Q9HCD6 1990 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 PPIAL4CA0A0B4J2A2 164 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 ZNF732B4DXR9 585 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 J3QLI3 93 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 FAM157CP0CG43 387 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 MUC1P15941 1255 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 THBS2P35442 1172 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 RBMXP38159 391 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 GPM6AP51674 278 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 LCN2P80188 198 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 SMN1Q16637 294 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 MICBQ29980 383 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 CEP78Q5JTW2 689 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 DCAF12L2Q5VW00 463 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 FAHD2BQ6P2I3 314 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 WDR82Q6UXN9 313 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 TMPRSS11AQ6ZMR5 421 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 GCSAMQ8N6F7 178 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 ZNF671Q8TAW3 534 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 HPSE2Q8WWQ2 592 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 TFAP2CQ92754 450 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 PELI1Q96FA3 418 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 FAHD2AQ96GK7 314 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 TECTBQ96PL2 329 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 OR5V1Q9UGF6 321 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 SLC7A11Q9UPY5 501 aa14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 NIPBLQ6KC79 2804 aaeCLIP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 FN1P02751 2386 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 YLPM1P49750 1951 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-212ENST00000596163 LOC107986453A0A1B0GWG9 222 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 A8MXK9 166 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 C3orf80F5H4A9 247 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 GATBO75879 557 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 ISG15P05161 165 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 SRD5A1P18405 259 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 MYL12AP19105 171 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 CD80P33681 288 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 SRP14P37108 136 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 KIR3DL2P43630 455 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 GNB2P62879 340 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 CSNK2BP67870 215 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 ALKBH1Q13686 389 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 TEX36Q5VZQ5 186 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 TMEM42Q69YG0 159 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 SFRP4Q6FHJ7 346 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 ZNF573Q86YE8 665 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 SCCPDHQ8NBX0 429 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 RPL3LQ92901 407 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 TMEM80Q96HE8 168 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 SSBP3Q9BWW4 388 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 FRRS1LQ9P0K9 344 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 ERVK-18Q9QC07 812 aa14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 POLR3KQ9Y2Y1 108 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 EXOSC1Q9Y3B2 195 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-212ENST00000596163 EFCAB10A6NFE3 127 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 ANKRD61A6NGH8 418 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 SRRM5B3KS81 715 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 CCDC159P0C7I6 412 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 PITPNBP48739 271 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 NPY4RP50391 375 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 ZNF676Q8N7Q3 588 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 PP6455Q8WZ26 134 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 C12orf43Q96C57 262 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 OR51I2Q9H344 312 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 METTL17Q9H7H0 456 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 GPR173Q9NS66 373 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 CLN8Q9UBY8 286 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 HHLA2Q9UM44 414 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 DIMT1Q9UNQ2 313 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 CAB39Q9Y376 341 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 ZFHX3Q15911 3703 aa14.45□□□□□ -0.1
SHKBP1-212ENST00000596163 ADAM20O43506 726 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 PIPP12273 146 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 ZFP36P26651 326 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 TGM4P49221 684 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 NANOS3P60323 173 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 SCGB2A2Q13296 93 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 RDH10Q8IZV5 341 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 C19orf18Q8NEA5 215 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 NRG4Q8WWG1 115 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 RNF166Q96A37 237 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 ZNF649Q9BS31 505 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 COMMD4Q9H0A8 199 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 ISG20L2Q9H9L3 353 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 PLCXD1Q9NUJ7 323 aa14.44□□□□□ -0.1
SHKBP1-212ENST00000596163 CNOT2Q9NZN8 540 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms