RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ZNF826PQ6ZT77 177 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 C11orf53Q8IXP5 236 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 NANOGP1Q8N7R0 232 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ZNF485Q8NCK3 441 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 CLDND2Q8NHS1 167 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 SGCDQ92629 289 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 C10orf35Q96D05 121 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 PDCD1LG2Q9BQ51 273 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 CDCA4Q9BXL8 241 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 FGF23Q9GZV9 251 aaPredicted RBP12.08□□□□□ -0.48
LIG1-208ENST00000595758 GSX1Q9H4S2 264 aaPredicted RBP12.08□□□□□ -0.48
LIG1-208ENST00000595758 DUSP21Q9H596 190 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 TRIM36Q9NQ86 728 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 GPR173Q9NS66 373 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 PAK1IP1Q9NWT1 392 aaPredicted RBP12.08□□□□□ -0.48
LIG1-208ENST00000595758 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ABCA1O95477 2261 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 OR5B21A6NL26 309 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 CDIPTO14735 213 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 OGG1O15527 345 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 RGS10O43665 173 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 ZNF205O95201 554 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 LALBAP00709 142 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 IGHV2-70P01814 119 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 HEXAP06865 529 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 ZNF20P17024 532 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 CRHBPP24387 322 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 IL2RGP31785 369 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 GZMKP49863 264 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 WNT4P56705 351 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 LMO4P61968 165 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 CDK5R1Q15078 307 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 FAM76BQ5HYJ3 339 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 RBM48Q5RL73 367 aaKnown RBP12.07□□□□□ -0.48
LIG1-208ENST00000595758 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 LRRC28Q86X40 367 aaPredicted RBP12.07□□□□□ -0.48
LIG1-208ENST00000595758 BOLLQ8N9W6 283 aaKnown RBP12.07□□□□□ -0.48
LIG1-208ENST00000595758 OR51A4Q8NGJ6 313 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 OR13C3Q8NGS6 347 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 FGGYQ96C11 551 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 ADAT3Q96EY9 351 aaPredicted RBP12.07□□□□□ -0.48
LIG1-208ENST00000595758 GAL3ST1Q99999 423 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 TLNRD1Q9H1K6 362 aa12.07□□□□□ -0.48
LIG1-208ENST00000595758 SIRT4Q9Y6E7 314 aaPredicted RBP12.07□□□□□ -0.48
LIG1-208ENST00000595758 PPIAL4EA0A075B759 164 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 PPIAL4DF5H284 164 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 GATBO75879 557 aaKnown RBP12.06□□□□□ -0.48
LIG1-208ENST00000595758 PPIAL4FP0DN26 164 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 MDH2P40926 338 aaKnown RBP12.06□□□□□ -0.48
LIG1-208ENST00000595758 TAS2R43P59537 309 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 KRTAP1-1Q07627 177 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 CYB5R2Q6BCY4 276 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 WDR82Q6UXN9 313 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 MUC20Q8N307 709 aaPredicted RBP12.06□□□□□ -0.48
LIG1-208ENST00000595758 SPICQ8N5J4 248 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 PP6455Q8WZ26 134 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 RPL3LQ92901 407 aaKnown RBP12.06□□□□□ -0.48
LIG1-208ENST00000595758 MND1Q9BWT6 205 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 CHST5Q9GZS9 411 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 OR51I2Q9H344 312 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 METTL17Q9H7H0 456 aaPredicted RBP12.06□□□□□ -0.48
LIG1-208ENST00000595758 ZNF665Q9H7R5 613 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 TMEM165Q9HC07 324 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 UBAP1Q9NZ09 502 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 BLOC1S6Q9UL45 172 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
LIG1-208ENST00000595758 PQLC2LA1A4F0 135 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 FSTL3O95633 263 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 LHBP01229 141 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 MT-ND2P03891 347 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 EEF1B2P24534 225 aaKnown RBP12.05□□□□□ -0.48
LIG1-208ENST00000595758 CFHR2P36980 270 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 IRF3Q14653 427 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 UBE2V2Q15819 145 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 DMKNQ6E0U4 476 aaPredicted RBP12.05□□□□□ -0.48
LIG1-208ENST00000595758 ZFP41Q8N8Y5 198 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 DEFB108BQ8NET1 73 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 TSEN15Q8WW01 171 aaKnown RBP12.05□□□□□ -0.48
LIG1-208ENST00000595758 GHSRQ92847 366 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 TECTBQ96PL2 329 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 CCDC90BQ9GZT6 254 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 DHDHQ9UQ10 334 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
LIG1-208ENST00000595758 FAM230AA0A1W2PPH8 454 aa12.04□□□□□ -0.48
LIG1-208ENST00000595758 LGALS8O00214 317 aa12.04□□□□□ -0.48
LIG1-208ENST00000595758 CD5LO43866 347 aa12.04□□□□□ -0.48
LIG1-208ENST00000595758 IGHV2-5P01817 119 aa12.04□□□□□ -0.48
LIG1-208ENST00000595758 CD80P33681 288 aa12.04□□□□□ -0.48
LIG1-208ENST00000595758 FUT6P51993 359 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms