RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 HIST1H2AAQ96QV6 131 aa14□□□□□ -0.17
CCDC9-202ENST00000595659 DCTN5Q9BTE1 182 aa14□□□□□ -0.17
CCDC9-202ENST00000595659 TMEM269A0A1B0GVZ9 245 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 CLPSL1A2RUU4 121 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 NKX6-3A6NJ46 265 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 PRR32B1ATL7 298 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 ZNF732B4DXR9 585 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 GYG2O15488 501 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 NDUFA7O95182 113 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 NDUFB7P17568 137 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 DCTDP32321 178 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 GABRA2P47869 451 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 C11orf91Q3C1V1 193 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 SLC35D3Q5M8T2 416 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 ATPAF1Q5TC12 328 aaPredicted RBP13.99□□□□□ -0.17
CCDC9-202ENST00000595659 BRICD5Q6PL45 260 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 COMMD2Q86X83 199 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 CMTM4Q8IZR5 234 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 OR10Z1Q8NGY1 313 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 ANGPTL6Q8NI99 470 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 DYRK2Q92630 601 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 TEAD3Q99594 435 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 NIPAL2Q9H841 368 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 ELL3Q9HB65 397 aaPredicted RBP13.99□□□□□ -0.17
CCDC9-202ENST00000595659 DNAJB9Q9UBS3 223 aa13.99□□□□□ -0.17
CCDC9-202ENST00000595659 SLC25A10Q9UBX3 287 aaPredicted RBP13.99□□□□□ -0.17
CCDC9-202ENST00000595659 PKD1L1Q8TDX9 2849 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 ZNF816-ZNF321PA0A0X1KG74 233 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 A0A1B0GUS0 222 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 CCDC182A6NF36 153 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 M0R129 80 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 GLRA1P23415 457 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 MAP2K3P46734 347 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 TAF9Q16594 264 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 FAM76BQ5HYJ3 339 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 ZNF788Q6ZQV5 615 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 MOB3CQ70IA8 216 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 BCDIN3DQ7Z5W3 292 aaKnown RBP13.98□□□□□ -0.17
CCDC9-202ENST00000595659 LINC01006Q8NI28 216 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 OR51E1Q8TCB6 317 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 TEX12Q9BXU0 123 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 YIPF3Q9GZM5 350 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 SLC25A19Q9HC21 320 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 ABCB9Q9NP78 766 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 FAM206AQ9NX38 181 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 NLKQ9UBE8 527 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 COPS3Q9UNS2 423 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 RNF114Q9Y508 228 aa13.98□□□□□ -0.17
CCDC9-202ENST00000595659 A0A1W2PQ09 198 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 OR2AT4A6NND4 320 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 GPR37O15354 613 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 MAGEB4O15481 346 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-202ENST00000595659 PRKYO43930 277 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 EEF1B2P24534 225 aaKnown RBP13.97□□□□□ -0.17
CCDC9-202ENST00000595659 DAPP51397 102 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 CRISP1P54107 249 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 DEFA6Q01524 100 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 MFGE8Q08431 387 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-202ENST00000595659 KCTD18Q6PI47 426 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-202ENST00000595659 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 THAP5Q7Z6K1 395 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 LDLRAD3Q86YD5 345 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 ZNRF1Q8ND25 227 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 MED30Q96HR3 178 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 PBOV1Q9GZY1 135 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 OR51I2Q9H344 312 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 DPAGT1Q9H3H5 408 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 YY1AP1Q9H869 796 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 GPR84Q9NQS5 396 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 PAPOLBQ9NRJ5 636 aaKnown RBP13.97□□□□□ -0.17
CCDC9-202ENST00000595659 POMPQ9Y244 141 aa13.97□□□□□ -0.17
CCDC9-202ENST00000595659 IGKV1D-17A0A075B6S4 117 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 TCRBV3S1A0A5B6 114 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 MEIOCA2RUB1 952 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 NPFFO15130 113 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 MITFO75030 526 aaPredicted RBP13.96□□□□□ -0.17
CCDC9-202ENST00000595659 ACAA1P09110 424 aaPredicted RBP13.96□□□□□ -0.17
CCDC9-202ENST00000595659 FBP1P09467 338 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 PSG2P11465 335 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 FAHP16930 419 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 GNG3P63215 75 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 CEACAM21Q3KPI0 293 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 HAGHLQ6PII5 290 aaPredicted RBP13.96□□□□□ -0.17
CCDC9-202ENST00000595659 TMEM185AQ8NFB2 350 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 TNFRSF14Q92956 283 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 DUS3LQ96G46 650 aaKnown RBP13.96□□□□□ -0.17
CCDC9-202ENST00000595659 ZNF488Q96MN9 340 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 CITED1Q99966 193 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 MROQ9BYG7 248 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 IKZF2Q9UKS7 526 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 GTF2A1LQ9UNN4 478 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 PIGLQ9Y2B2 252 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 MAB21L2Q9Y586 359 aa13.96□□□□□ -0.17
CCDC9-202ENST00000595659 A0A0U1RQV5 110 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 GSC2O15499 205 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 SAA4P35542 130 aa13.95□□□□□ -0.18
CCDC9-202ENST00000595659 RIPPLY1Q0D2K3 151 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms